Pseudomonas aeruginosa AZPAE12411, NQ20_RS14380
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE12411 AZPAE12411_contig_17, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGACCTGGAACTGGTGGCGGCGAACTTCGTTTCCGGCGAGACGCCGGCGCGCCGCCGCGACTGCGCGACGACGGATTGCCCGGCACCGCTGCACACCCT GTCGAAGACCGATACGGAGGAAAACCGGAGCGCGCTCAATTGAGACCGCGAAGGACGTGCAGGCAATTGTTCGCCTGGCGTGAAGTCGATGTCCCGGGCG GGTCGACAGAGGTCGAACAATACGCATGGAATTGTTTTTTCAATAAGGCGCTATTTATATGAAACGGTTTTTATAATATTCCAGTGTCTTCGGTAGTTTA TCTTTCCTGCATGATTTCATATATGCGGAATTCGTTCGTGCATATACTTTAAGTGCAGCTTAATTTTTTCATGAAACCTGTGGACATTGGAAAATGAGCT GTGTCAGTTTGGACTTCGGCCTGATCTGGCCGATAACTGCAATTATCCATCCGATAATTGTATCCGAGTTATTTCCTTTACAACTTAAAGGGATATGACA
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| DNA Sequence for Gene |
>NQ20_RS14380
ATGTCCAGCAATTCTCTTGCATTGAAAGGTCGTAGCGATGCGTATACCCAGGTAGACAACTTCCTGCATGCCTATGCGCGGGGCGGGGACGAATTGGTCA ATGGCCATCCGTCCTATACCGTAGACCAGGCGGCGGAGCAGATCCTCCGCGAACAGGCGTCTTGGCAGAAAGCACCGGGCGACTCGGTGCTGACCCTGTC CTATTCGTTCCTGACCAAGCCGAACGACTTCTTCAATACGCCGTGGAAGTATGTCAGCGATATCTACTCGCTGGGCAAGTTCAGCGCCTTCTCCGCGCAG CAGCAGGCCCAGGCCAAGTTGTCGCTGCAATCCTGGGCGGACGTCACCAATATCCACTTCGTCGACGCCGGCCAGGGCGATCAGGGCGACCTGACCTTCG GCAACTTCAGCAGTAGTGTCGGCGGTGCGGCGTTCGCCTTCCTGCCGGATGTACCGGATGCGCTCAAGGGGCAATCCTGGTACCTGATCAACAGCAGCTA CAGCGCCAACGTCAATCCGGCCAACGGCAACTACGGACGCCAGACCCTGACCCACGAGATCGGCCATACCCTGGGCCTGAGCCACCCCGGCGACTACAAC GCCGGCGAGGGCGATCCCACCTACGCCGACGCTACCTACGCCGAGGACACCCGCGCCTATTCGGTGATGAGCTACTGGGAAGAGCAGAACAGCGGCCAGG ACTTCAAGGGCGCCTATTCCTCGGCACCGCTGCTGGACGACATCGCGGCGATCCAGAAGCTCTACGGGGCCAACCTGACCACTCGCACCGGCGACACGGT GTACGGCTTCAACTCCAACACCGAGCGCGACTTCTACAGCGCCACCTCGTCCAGTTCCAAGCTGGTGTTCTCGGTGTGGGACGCCGGCGGCAACGACACC CTGGACTTCTCCGGCTTCAGCCAGAACCAGAAGATCAACCTCAACGAGAAGGCGCTGTCCGATGTCGGCGGGTTGAAGGGCAATGTGTCGATCGCTGCCG GGGTCACCGTGGAAAACGCCATCGGCGGCTCGGGTAGCGACCTGTTGATCGGCAACGACGTGGCCAACGTGCTCAAGGGCGGCGCCGGCAACGACATCCT CTACGGCGGCCTCGGCGCGGACCAGCTGTGGGGTGGCGCGGGAGCCGACACCTTCGTCTACGGCGATATCGCCGAGTCCTCCGCGGCGGCGCCGGATACC CTGCGCGACTTCGTCAGCGGCCAGGACAAGATCGACCTGTCCGGGCTGGACGCCTTCGTCAACGGCGGGCTGGTGCTGCAATACGTCGACGCCTTCGCCG GCAAGGCCGGCCAGGCGATCCTGTCCTACGACGCGGCGAGCAAGGCCGGCAGCCTGGCGATCGACTTCAGCGGGGATGCCCATGCCGATTTCGCGATCAA TCTGATCGGCCAGGCGACCCAGGCCGACATCGTCGTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGCGCTGACACGGGCGCGGTTCGGTGCGGCGGTACGAACCGCGGCCCTTCGGCCGGCCGGGCACTGTTCGAATTGATAGGTGTCTTCCACAGGAGCGAAG TTGTGAACTGTGGCGCGCCCGTGGGCCGGCGACCCGGCGGACGAACGGAGGCCCGCGGCGCCTGGCGCGCGCTGGCGTTCGAAGCGAGGATGGCGGGCGG CGTTCGCCGTGTTATCCGATGTTCCAGGCTTGAAGGAGATCTCTCGATGTCGGCAAGCGCGAAGCTCTCCAGGATGGTTTGCTTGCTCTGCGGTTTTTTC AGCACAGGTATCAGTATGGCCAGCAGTCTGATTCTTCTCAGCGCTTCCGATCTCGCCGGGCAATGGACCCTGCAGCAGGACGAGGCGCCCGCGATCTGCC ACCTGGAGCTGCGCGACAGCGAAGTGGCGGAAGCCAGTGGCTACGACCTGGGCGGCGATACCGCCTGCCTCACGCGCTGGCTGCCCAGCGAGCCGCGCGC
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| Amino Acid Sequence |
>serine 3-dehydrogenase
MSSNSLALKGRSDAYTQVDNFLHAYARGGDELVNGHPSYTVDQAAEQILREQASWQKAPGDSVLTLSYSFLTKPNDFFNTPWKYVSDIYSLGKFSAFSAQ QQAQAKLSLQSWADVTNIHFVDAGQGDQGDLTFGNFSSSVGGAAFAFLPDVPDALKGQSWYLINSSYSANVNPANGNYGRQTLTHEIGHTLGLSHPGDYN AGEGDPTYADATYAEDTRAYSVMSYWEEQNSGQDFKGAYSSAPLLDDIAAIQKLYGANLTTRTGDTVYGFNSNTERDFYSATSSSSKLVFSVWDAGGNDT LDFSGFSQNQKINLNEKALSDVGGLKGNVSIAAGVTVENAIGGSGSDLLIGNDVANVLKGGAGNDILYGGLGADQLWGGAGADTFVYGDIAESSAAAPDT LRDFVSGQDKIDLSGLDAFVNGGLVLQYVDAFAGKAGQAILSYDAASKAGSLAIDFSGDAHADFAINLIGQATQADIVV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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