Pseudomonas aeruginosa AZPAE12411, NQ20_RS02195

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE12411 AZPAE12411_contig_1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATCACCGTCGGCGGCAACTGGAAGGTCCAGGCGAAGTTCACCAGGGTCAGTTCCAGCGCCACCAGGAACAACCCGCGCTTGAACAGGAACGCCGAGACCG CCCGGCGTCCCTGGTGCTTCTCGCCGTAGAGGAATGCCGACAGGCCGGTGAGGAAGACGAACACCGGCGCGCACAGGTGCGCCAGGGTGCGGCTGAGGAA CAGCGCCGGCTCGGTGCTGGCGACGTCCATCGGGTCGCCGACCTGGCGGTGCAGGAAAAAGGTCTCGCGGACATGGTCGAGCAGCATGAACAGCATCACC AGGCCGCGCAGGGCGTCGATGCTGTGCAGGCGGGAGGAATTGGAGATGGAGTTGGGCATGGCTGGGCTGGTCGTCGGAAAAGAGGGATGAGTATCACAGC CTGGCGGCGAGACGCGAGATAGAGCCGGGCATTGTATTGCGAGGCCGGAATCGAACTGGTAGCGTTATAGTATATCATTTCTTTTCTGGTGCGATTTCCC
DNA Sequence for Gene
>NQ20_RS02195
ATGAGAGTCAGTGTGTCGCTTGTCCTCGGTGTCGGCCTCGGTTGCAGCAGTCCGGCGCTCTGGGCGGAAACGGAAAGTCCCGCGGAGCTTGAGGTCCTCA CTGTCACCGCCGAAGCGGAGCGCGCGGCGGGCCCGGTGCAGGGCTACCGGGCCAATCGGACGGCCAGCGCGACGCGCACCGACACCCGTATCGAGGACAT CCCGCAAGCCATCAGCGTGGTGCCGCGCCAGGTGCTCGACGACCTTGACAGCGCTCGTATCGAACGGGCGCTGGACTTCGCCGGCGGGGTCTCGCGGCAG AACAACTTCGGCGGCCTGACGATGTTCGAGTACAACGTCCGTGGCTTCACCACTTCGGAGTTCTACCGCGACGGCTTCAGCGCCAACCGCGGCTATATGA ACGCCCCGGACAGCGCCACCATCGAGCGCGTGGAAATCCTCAAGGGACCGGCCTCCAGCCTGTACGGGCGCGGCGATCCCGGCGGCACGGTGAACCTGGT GACCAAGAAGCCCCAGGCCGAGCGCTTCGCCCGCCTGCATGCCAGCGCCGGCAGTTGGGACCGCTACCGCTCGACCCTGGACCTGAACACGCCGCTGGAC GAAGAGGGCGACCTGCTCTACCGGATGAACCTGGCGGTGGAGGACAGCAAGGGCTTCCGCGACTACGCCGACGGCCAGCGCCTGCTGGTGGCGCCATCGT TCAGCTGGCAACTGGACCCGGACACCTCGTTGCTGGTGGAAGCCGAGGTGGTGCGCAACCGCCAGGTCTTCGACCGCGGCACCGTGGCGCCGCACAACCA CCTGGGCAGCCTGCCGCGCTCGCGGTTCTTCGGCGAACCGGACGACGGCAAGATCGACAACAACAACGAAACCCTCCAGGCCACCCTGCGCCATCACTTC AACGAGCAGTGGAGCCTGCGCCTGGCCAGCCACTACAAGCATGGCCACCTGGACGGCTACGCCTCGGAGAACTCCAGCCTCGCCGCCGACGGCTACAGCC TGCGCCGGGAGTACCGCTACCGCGACTTCGAGTGGCACGACAGCATCACCCAGCTCGACCTGCTCGGCGACCTCCATACCGGCTCGATCCGCCACCAGTT GCTGATGGGCCTCGAGTACGAGCGCTACCACAACGACGAACTGATCCTGCGTAGCATCCCGTCGCGCAACCCCTATGCCATCGACATCCGCCGGCCGGTC TACGGCCAGCCGAAACCACCCTTCGGACGCGACGACCGCAACCACGAGGAAGTCGACGCGATGGCCCTCAACCTGCAGGACCAGATCGAGTTCAGCGAGA AATGGCGCGGCCTGCTCGGCGTGCGCTTCGACCGCTACCGCCAGGACATGAACGCCACGCGCCTGAACAATGGCCGCTTCCGCGACGCCAGCTCGCAGCA GACCCAGCGTGCCGCCACCCCGCGCATCGGCGTGCTGTACCAGGCGACCCCGGAGGTCGGCCTGTTCGCCAACGCCTCGAAATCCTTCAAGCCCAATGGC GGTACCGACATGGCCGGCAAGGCCTTCGACCCGGAGGAGGGGCGCGGCTACGAGGCGGGGGTGAAGCTCGACCTGCTCGATGGCCGGCTGGGCATGACCC TCGCCGCGTTCCACCTGAAAAAGAAGAACGTGCTCACCGCCGACCCGAGCAATCCCGGTTACCAGCAGACCGCCGGCGAGGCGCGCAGCCAGGGCTTCGA CCTGCAGTTCAGCGGCCAGCTCACCGAGCAGTTGCGGCTGATCGGCGCCTACGCCTATATCGACGCCGAAGTGACCAAGGATGAGAACATCGCTCGCGGC AGCCGCCTGCTCAACGTGCCGAAGCACAGCGGCAGCCTGATGGGCGTCTACGAGTTCCGCGAAGGCTGGCTGCACGGCGCCGATGCCGGCGCGGCGGTCA ACTATGTCGGCGAGCGCGCCGGCGACAGCAGCGACAGCGGCTTCGAACTGCCGGCCTACACCACCGTCGACCTGCTCGCGCACTATCCGCTGGCGAGCAA TGCCACCCTCGGGGTGAACGTCAACAACCTCTTCGATCGTCGCTACTACGAGCGTTCCTATAACAACGTCTGGGTCGCCCCCGGCGAGCCGCGCAACCTG ACCATGAGCCTGACCCTGAACTACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCCTCTACCGCCGCCAGGAAGCCATGCCATGCAAGGACGCACACCGCTGCTGGAAACCCTCCGCGAACTGGAATGCGAGATTCGCCTGCTCACCGTCTA TGCCCGCGAGTGTTGCGACTGCTACGAGATCCTCAGGCGCAAGCTCGACCGTCTGAGCGGACTGATCGGGGAGGATTGCAGCCGGGCGCAGTGGCAGGCC GATTCGGACGATCCTGCGTTGCAGGCGCTCGGCCTGCGCCTGCGCGACGCGGCGGTGCAGGCCCTCTGCGAACTGGAGAAGCACCTTTGCCAGGGCGTGC TGCATGAACCCGGCGAGATGGGCCGCTACCTGGGTAGCCTGCTGGAATCCATCCGCGGCGAACTCGACAGCGCCGGGATAGATGCCGATGCACGGGTCCT GTTCGTCGGCTCCGGTGCCCTGCCGACCTCGGCCCTGGTGCTGGCGCGGGAGGTCGGCGCACATTTGTGCTGCCTGGACATCGACGAGGAGGCCCTGGGC
Amino Acid Sequence
>TonB-dependent receptor
MRVSVSLVLGVGLGCSSPALWAETESPAELEVLTVTAEAERAAGPVQGYRANRTASATRTDTRIEDIPQAISVVPRQVLDDLDSARIERALDFAGGVSRQ NNFGGLTMFEYNVRGFTTSEFYRDGFSANRGYMNAPDSATIERVEILKGPASSLYGRGDPGGTVNLVTKKPQAERFARLHASAGSWDRYRSTLDLNTPLD EEGDLLYRMNLAVEDSKGFRDYADGQRLLVAPSFSWQLDPDTSLLVEAEVVRNRQVFDRGTVAPHNHLGSLPRSRFFGEPDDGKIDNNNETLQATLRHHF NEQWSLRLASHYKHGHLDGYASENSSLAADGYSLRREYRYRDFEWHDSITQLDLLGDLHTGSIRHQLLMGLEYERYHNDELILRSIPSRNPYAIDIRRPV YGQPKPPFGRDDRNHEEVDAMALNLQDQIEFSEKWRGLLGVRFDRYRQDMNATRLNNGRFRDASSQQTQRAATPRIGVLYQATPEVGLFANASKSFKPNG GTDMAGKAFDPEEGRGYEAGVKLDLLDGRLGMTLAAFHLKKKNVLTADPSNPGYQQTAGEARSQGFDLQFSGQLTEQLRLIGAYAYIDAEVTKDENIARG SRLLNVPKHSGSLMGVYEFREGWLHGADAGAAVNYVGERAGDSSDSGFELPAYTTVDLLAHYPLASNATLGVNVNNLFDRRYYERSYNNVWVAPGEPRNL TMSLTLNY
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site