Pseudomonas aeruginosa M18, PAM18_5408 (amtB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa M18 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCGCGTTACAAAGCCAGACACTGCGCTTAGACTGTCCTCGGGTTCGTTTTCCTGGGGCGAGTCCACCAAACACGGGAGAGAGTTTCATGAAGCTAGTCAC TGCCATCATCAAGCCGTTCAAGTTGGACGACGTCCGCGAGTCGTTGTCCGAGATCGGTGTGCAGGGCATCACGGTGACCGAGGTCAAGGGTTTCGGCCGG CAAAAGGGCCACACCGAGCTGTATCGCGGCGCCGAGTACGTCGTCGACTTCCTGCCCAAGGTGAAGATCGACGTGGCGATCGCCGACGACCAGCTGGACC GCGTCATCGAGGCGATCACCAAGGCGGCCAATACCGGCAAGATCGGTGACGGCAAGATCTTCGTGGTGAACCTGGAACAGGCCATCCGCATCCGTACCGG CGAAACCGATACCGACGCGATCTAAGCCCAACCGAACCCCCAAAAGCCCCAGGAGAATACCAACATGACTCTGCGTAAGATCGCAGGGCTAGGAGCCCTA
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| DNA Sequence for Gene |
>PAM18_5408
|amtB
TTGTCCCTCGCTTTGCCGGGCGTCGCCCTGGCCGCCGAGGAGCCCGTCCTGAACAGCGGCGACACCGCCTGGATGCTGATCTCCACTGCGCTCGTCCTGC TCATGACCATCCCCGGCCTGGCGCTGTTCTACGGCGGCATGGTGCGAGCGAAGAACGTGCTGTCGATCATGATGCAGTGCTTCGCCATCACCGGCCTGAT CACCATTCTCTGGGTGGTCTATGGCTACAGCCTGGCGTTCGATACCGCCGGGATGGAGAAGGGCGTCCTCAACTTCAATTCCTTCGTCGGCGGACTGGAC AAGGCCTTCCTCAGCGGTCTCACCGCCGACGGCCTGACTTCCGCCACCGCGCTGTTCCCGGAAAGCGTGTTCATCACCTTCCAGATGACCTTCGCGATCA TCACTCCGGCGCTGATCGTCGGCGCCTTCGCCGAGCGCATGAAGTTCTCGGCGATGCTGATCTTCATGGCGGTCTGGTTCACCGTGGTCTACGCGCCGAT CGCGCATATGGTCTGGAGCGGTGACGGCGCCCTGATGTGGGACTGGGGCGTGCTGGACTTCGCCGGCGGCACCGTGGTGCACATCAACGCCGGTATCGCC GGCCTGGTCGCCTGCCTGGTGCTGGGCAAGCGCAAGGGCTACCCGACCACGCCGATGGCGCCGCACAACCTCGGCTACACCTTGGTCGGGGCGGCCATGC TGTGGATCGGCTGGTTCGGTTTCAACGCCGGTTCCGCCGCCGCCGCCAACGGCACCGCCGGGATGGCCATGCTGGTGACCCAGATCGCCACCGCCGCCGC GGCCCTGGCCTGGATGTTCGCCGAGTGGATCACCCACGGCAAGCCGAGCGCCCTGGGCATCGCGTCCGGCGTGGTCGCCGGTCTGGTGGCCATCACCCCG GCCGCCGGCACCGCCGGTCCGATGGGCGCGCTGGTGATCGGCCTGGCCTCCGGGGTGATCTGTTTCTTCGCCGCCACCAGTCTCAAGCGCGCGCTGAAAT ACGACGATTCCCTCGACGCCTTCGGCGTACATGCGGTCGGCGGTATCGTCGGCGCGCTGCTCACCGGGATCTTCGCGGCGCCGTCGCTGGGCGGCTTCGG CAGCGTGGAGGACATCGGCGCGCAGTTCTTCGTGCAATTCAAGGGCGTGGCCTTCACCGTGGTCTACACCGCCGTGGTGACCTTCGTGATCCTCAAGGTG CTGGACCTGGTCATGGGCCTGCGGGTCACCGAGGAAGAGGAAGCGGTCGGCCTCGACCTGGCGCTGCACAACGAGCGCGGCTACAACCTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TACCTGCCGGCGCCCGGCTTTCCGCCGGGCGTCGGTTTGCCTCCCGCGCTCGCCTTCGCCGAACGCCATGCCCTTGTGCGTCGAAAGTCCTGGGCGCTTC CCGCGACTGCCACCACCTTTCCGCAACCGGTCTTTCAGTGACTGCCAGCGGACTGCGCCACCATCAGCTTTCACAGGTCTGCCTCTTACGCTCTTTGCTT TTTCAAATGCCGCGCTAGAATGCGCGGCGCGACGGATCGGAGCCGATTTGGAACAGCAGCATGTGGCAGCAGACCCTGATCACCTTGCGCCCGCGTCCGC GGGGCTTTCACCTCGTCACCGAGGAGATACTCGACGCCTTGCCGGAGCTTCGGCGGTGCCGGGTCGGCCTGCTGCACCTGCTTTTGCAACATACGTCGGC TTCACTGACCCTGAATGAAAATGCCGATCCTGCCGTACGCCGGGATTTCGAGCGTTTTTTCGAGCGGCTGGCGCCACGCGGCGAAGTCGGCTATGAACAC
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| Amino Acid Sequence |
>ammonium transporter AmtB
MSLALPGVALAAEEPVLNSGDTAWMLISTALVLLMTIPGLALFYGGMVRAKNVLSIMMQCFAITGLITILWVVYGYSLAFDTAGMEKGVLNFNSFVGGLD KAFLSGLTADGLTSATALFPESVFITFQMTFAIITPALIVGAFAERMKFSAMLIFMAVWFTVVYAPIAHMVWSGDGALMWDWGVLDFAGGTVVHINAGIA GLVACLVLGKRKGYPTTPMAPHNLGYTLVGAAMLWIGWFGFNAGSAAAANGTAGMAMLVTQIATAAAALAWMFAEWITHGKPSALGIASGVVAGLVAITP AAGTAGPMGALVIGLASGVICFFAATSLKRALKYDDSLDAFGVHAVGGIVGALLTGIFAAPSLGGFGSVEDIGAQFFVQFKGVAFTVVYTAVVTFVILKV LDLVMGLRVTEEEEAVGLDLALHNERGYNL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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