Pseudomonas aeruginosa M18, PAM18_5280 (rmlA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008879 glucose-1-phosphate thymidylyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01207
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009058 biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00483
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0045226 extracellular polysaccharide biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01207
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG paf00525 Acarbose and validamycin biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG paf00521 Streptomycin biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG paf01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG paf00523 Polyketide sugar unit biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG paf01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.90.550.10 Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A IPR029044 Nucleotide-diphospho-sugar transferases 1 293 4.4E-100
Pfam PF00483 Nucleotidyl transferase IPR005835 Nucleotidyl transferase domain 4 240 2.4E-69
NCBIfam TIGR01207 JCVI: glucose-1-phosphate thymidylyltransferase RfbA IPR005907 Glucose-1-phosphate thymidylyltransferase, short form 4 288 0.0
SUPERFAMILY SSF53448 Nucleotide-diphospho-sugar transferases IPR029044 Nucleotide-diphospho-sugar transferases 1 288 4.77E-93
PANTHER PTHR43532 GLUCOSE-1-PHOSPHATE THYMIDYLYLTRANSFERASE IPR005907 Glucose-1-phosphate thymidylyltransferase, short form 4 290 0.0
CDD cd02538 G1P_TT_short IPR005907 Glucose-1-phosphate thymidylyltransferase, short form 3 242 0.0
FunFam G3DSA:3.90.550.10:FF:000023 Glucose-1-phosphate thymidylyltransferase - - 1 293 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.