Strain | Pseudomonas aeruginosa M18 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CTGGCTGGTGGCGGTGGAAAGCGCTCCGCGCGCCGTGGCCGAGGGCGACTGGCTCTGGTATAACCTCGCCACCCCGCCGCGCCTGGGCCTCGCCGCTCCG GTGAAGAAGCTGCTCAAGCGCGCAGAACAGGAACTCGGACGCGGCACGGCCGCGTGAATGCCGGGCCCGCGGGCCCGGCGGCAACTGCAGGAGAACGACC ATGAGCCGCACCGTGATGTGCCGCAAATACCACGAAGAGCTGCCCGGCCTCGACCGCCCGCCGTATCCTGGCGCGAAGGGCGAGGACATCTACAACAACG TGTCGCGCAAGGCCTGGGACGAGTGGCAGAAGCACCAGACCATGCTGATCAACGAGCGTCGCCTGAACATGATGAACGCCGAGGACCGCAAGTTCCTCCA GCAGGAGATGGACAAGTTCCTCTCCGGCGAGGACTACGCCAAGGCCGACGGCTACGTGCCGCCATCCGCCTGACCCCCACCCCGCCCGACGGAGGCCGCC
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DNA Sequence for Gene |
>PAM18_5265
ATGACCCCATCCCTCTCTGGCCTGCCTCCGATCCGCACCGCGCTGATCGGCTACGGCTTCGCCGGCAAGACCTTCCACGCCCCGCTGATCCGCGCGGTAC CGGCGTTGTGCCTGGAGCACGTGGTCTCCCGCGACCCTGGGCGGGTGCACGCCGACCTGCCCGAAGCCCGGGTCAGCGCCGATCCGGATGAGGCCATCGA GGCCGCCGACATCGACCTGGTGGTCATCGCCTCGCCCAATGCCACCCACGCCAGCCTCGCCGAACGGGCCTTGCGCGCCGGCAAGCACGTGGTGGTGGAC AAGCCGTTCACCGTCACCCTGGCCGAAGCCCGGCGCCTCGCCGACCTCGCCCGTGAACGGCCTGGGCAGGTCCTCTCGGTGTTCCAGAACCGGCGCTTCG ACAGCGACTTCCTCGCCGTGGAGGCCGCCCTGCAGGCCGGCAGCATCGGCCCGGTGCGCTACTTCGAGTCGGCCATCGAGCGCTTCCGTCCGCAGGTCCG CGACCGCTGGCGCGAACACGACCTGCCCGGCTCCGGGCTGTGGTTCGACCTCGGCCCGCACCTGCTCGACCAGGCACTGTGCCTGTTCGGCGTACCGCAG CGTGTGCACGGACACCTGCGCCGGCTGCGCGAGGGCGCGCTGACCGACGACTGGTTCGAGGTCCTGCTCGATTATCCGCACTGCCAGGTAGCGCTGCGCG CCAGCATGCTCGCCGCCAATCCGGCGCCACGCTTCAATGTGCACGGCGACCACGGCAGCCTGCTCAAGGCCGGCGCCGACATCCAGGAAGCGCAACTGCT CCAGGGACTGCACCCCGGTTCCGCCGGCTGGGGCCGCGATCCCGACCTGCTGCAGCACATCGATGGCCAGGGCCTGCGCCAGTCGCTGGTCACCCCGGCA GGCGACCAGAGCCGCTACTACCAGGCGCTGGCCGCCGCCATCCGCGGCCAGTCGCGCAACCCGGTGTCGGCGCAACAGGCCTGCGCGCTGATGGCCCTGC TGGAGTTGGCACGACGCTCCGCCGAGGAAGGCCGAAGCCTGCCGGTGGAGCTGCGCGACGAGGAACGCCAGGCCTGGAACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGCCCGGCAGTCCGGCGGAAACCGCGAGGGGATCGTAAGGCGTTAAAAAACAAAAAAAATTTCTTCGCCGGTGTTGACACTGCCGCGCTAAACCCGTTTA ATTGCGCCCCGTTGCCCAGGTAGCTCAGTTGGTAGAGCAGGGGATTGAAAATCCCCGTGTCGGCGGTTCGATTCCGTCCCTGGGCACCATGAATACGACG AAAAGGCTCACCTCCGGGTGGGCCTTTTTGCTTTCCGCCGTTCGTCTAGACGTGCTGCCCGCCGTTGACGTGGATTTCCGCGCCATTCACGTAGGATGCG CCGCTGGTGCAGAGGAAGTAGATCAGCGAAGCGATCTCCTCCGGCCGGCCGAGGCGGTGCAGCGGGATGCTGCGCTCGACGATCTCCTCGGTGCCCGGCG ACAGGATCGAGGTGTCGATCTCCCCCGGCGCGATGGCGTTCACCCGCACCCCATGCGGGCCGAAGTCGTGGGCCATCTCGCGGGTCAGCGCGGACAACGC
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Amino Acid Sequence |
>hypothetical protein
MTPSLSGLPPIRTALIGYGFAGKTFHAPLIRAVPALCLEHVVSRDPGRVHADLPEARVSADPDEAIEAADIDLVVIASPNATHASLAERALRAGKHVVVD KPFTVTLAEARRLADLARERPGQVLSVFQNRRFDSDFLAVEAALQAGSIGPVRYFESAIERFRPQVRDRWREHDLPGSGLWFDLGPHLLDQALCLFGVPQ RVHGHLRRLREGALTDDWFEVLLDYPHCQVALRASMLAANPAPRFNVHGDHGSLLKAGADIQEAQLLQGLHPGSAGWGRDPDLLQHIDGQGLRQSLVTPA GDQSRYYQALAAAIRGQSRNPVSAQQACALMALLELARRSAEEGRSLPVELRDEERQAWN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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