Pseudomonas aeruginosa M18, PAM18_3881 (pyoS3A)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa M18 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GTTCCGCTGAGGATGGAAAGGGCATCATGGCTGAGGCGGCTTTATTCGTCGAACGATGGCTGGCCCTGCCGGTATATCGGCCAGGACTTCATGCGCTGCG GAAACGGCCTGACCAGGTACAGCGGCTTGCAATCAAAAACGCTGGGCTCGCAATCAGCGTGGCTTTGTCCGGAAGCTCGCGAAGGGGCGGCATGGATGAA TTTTGAAAGTGGGAGTTCGTTAATGGATTGAAGGGTATGCGGCTTCCGGCGCGGCCGAGGTGGATGAGGTTTGCGTCCAGAAAATGACCGTTTCATGGAC GCATACACGAACCTACAGCGCAAAAGGGGCAGTTCTGGAGAAGGGAATCAATGATGCCTGTATGGCAGTGGGGATGGTGTATTGAAGTTGATTGGCGTGC GTGCCCGGTGTGTTGACGTTGATTACGGAATACTTCTTCCACCTAAGGCTTGCGCTAGAAATAATCAACCTGCCCAGTGCTCATCCTGAGGAGTGAAAAT
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| DNA Sequence for Gene |
>PAM18_3881
|pyoS3A
ATGAGCGATGATTCACCTATTATTGTTTACGCAAACAGTCCAGCGGAAGTTATTCTAAACCCGACTCGCGACAGGAATGACATATTAAACAATTACCCGG CCGGGAATCCCTTCATTGGCTTAACGTATGCCATTGAAAAAGATTTCAAAGAGAGGAAAAAGAACCTGGAAGCAGGGGTGCAGTCAGAACTGGATGCGAT AGACGCAAAATATCCATCATTACCGAAAGGCTTTACACCGGAGCAATGGTTGGAGAGGGCTACTGCCGTTGTCACCGAGTTGCTCAATCAAAAGCGGCCG AAGCTAGATTATGAGCTGGGTATAGTCAAGAATTCGGCTAGTTTTGATAAGCTGCAAGCAAGCTACAACGCAATCATCCTGAATGATCAGATCAATAGTC TTCAAGAGCGCTTGAACAAGCTCAATGCTGAAACCGACCGCCGCCGGGCGGAGGCAGAAGCCCAGCGTCAGGCAGAAGCGGACGCCAAACGCAAAGCGGA AGAAGCGGCACGCCTGGAAGCCCAGCAGGTCACTCAACAGCTCGGTGCCGACTTCAACGCGATCACCGCTCCGACCGCCACCAAGGTCCAGCAACGTGTG AAAGCAGTGGATGCTAGTCTGTCTCAGGTTTCCACCCAGGTCAGTGGTGCAGTCGCCTCGGCAACCCAGGCGGTGCAGGTCAAGACAGCGCAAGCCCAGC AACAAGCCAACAGCCAGATTTCGTCCAGCCAGAACCTGATCAGCGCGGCATTTCGGAATCAGATTGCCTTGGCAGCACAGGCCAGTGGAGAAGCCCAGGT CACGGCTTTCAACACCAAAGTCAAGCAGATCGTCAACGAAGCCACGGCGTTTTCGACAGCACGAAAACAAGCGCTGGCTCAGTTTGCTGCCAATGCGGCC GCCGAGGTCGAAACCGAGGTCAACAGGCTAACCGCCCAGGTCAAGGCCAGCCCCACCAAGGCGGCTTCGCAAGCTGCACAAGCAACCCTTCGACAATTCA CTGAAAGCACCTATGCCAAGGTGAACACCTTTGCCCAGCAGACCGAAGCAGCGCTGCAGGCTAAGGCAAAAGAGGTCTCAGCAGCGGTAGCCGAAGCACA GCGTGCGGCGACCAACGATTTGCAAAAAACAGCCGATGTAGTACCAGGTCAGATCATCCAGGCTGCGAACACCTTGGCGATGCCGGCAACCTCTGCGCCG CTGGTTTCGGTGGCCGGGTTTGGTAGTGCGGCAGTGGAGACGGCTCGCCTGGCGGCTTCCCTAACGAATGCTGTCAATCGCTTGATTCAGATTGCTGGTA GTGGACCTGGCGCATACGTGGCCACCTTCGCGGTGCTGTCGCTGTATTCCGACCAGGCTGGTAAAGACAGTGACAAGGTTCCTGCCGGCGTTCGCAATGC ATTGGCACTGGATGCGTCCGCTTTGGGTCTTCCTGGCACGGCTGATTTGCAAAGCGCCGCCAAGGCAGGTGGCACGGTTGATATGCCGGTACGACTCACG AGTGCTGCACAAGAGAGCCCGAGTGGTAAATCGCAGATTGCCGCGGTGCTGACCAACGGGGCAACTGTCCCCAAGGGCGTGCCTGTTCGCGCCGCGACCC TCAATACTGCGACGGGCCGGTATGAGGTGACGGTTCCCGCAAAGTCCACCGTGCCGAATACACCCCCGCTGATCTTGACCTGGACCCCTGCTACCCCTCC AGGAAGCCAGAACCCCTCAAGCACCACTCCGGTCGTGCCGCAGCCGGTTCCGGTGTATGAGGGAGCAACGATCACCCCAGTACAGGCCGAGCCGGAGTCC TACCCGGGAGTGCCTTTAGACCTGGACGATCTGATCGTGATTTTCCCGGCGGGCTCGGACGTTCCTCCGCTCTATCTGGTCTTTTCCAAGCCGCCGGTTA AGCTACTGGAGGTGGACATCTATGGTAACTTTGCGGGACGACCTCGTGATGGAAACCATCTTGACCATATGCCCTCACAGGGCGCGCTTGCCGAATCGTT GCTCTCAAAAAATCCTGGGCTCACTTACGATAATATTCGAGGGTACCTGAAAAATGGGGCCAGCGTTGCAATTCCTGCGCGCATACATCAGAAATATAGT GAAACATACGGCGGACGCAACACGAAGGAACGGCAAAGAAAAGACGCCTCTGACTTGCGAGCCGCAGTAGATAGTAATTTCGATGCAATCAAGGGAGCCC TGTTGGAACAGGGGGTTTCTGAGAAAGAACTAGAGATAGCTCGTGCATCCATGCACAGAATCAATGTAGAACAAGGGTGGTACGAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACGCAACGTCAATTCTTAAGGTTATCGAAGGACTAGGAAAAAGTTATGAGGAACTAGTCACGAAAAGTATAATCCCTAAAGGTATTTTAGAAGAGCCGTA TGATGGCTGCGACCATTTGACAAATAGCCCAGAGGAGGGCATCGAGCTGGCATTTGAGAAAGATACTAATCGCCTAGATAAAATTAGTTTTCTACTGATC AGGACTGTTGGGGAACTCCGTCCATATGCCGGCGATCTGCCGCAACCTTTCTCAAAAGAAATGGATAAAGCAGGTGTGCGTTCTATTCTCGGAGTGCCCG AGGATACAAAAGAGCCTTTTAAGATGCCCGTGATCGGTTTGGTAGGAGGGTGGGACTATTATGCTTACCCAGAGCGGCCTGAAATTAAAGTCTTTTTCAG CTATACCGCTGAAATGAAAGTTGATACGCTTTCGTTTATCTTAAAAGAATCTGTGAATACATAACTTGGCTCCGGCGTTTTGATGAATATAGGCAGAGGT
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| Amino Acid Sequence |
>pyocin killing protein
MSDDSPIIVYANSPAEVILNPTRDRNDILNNYPAGNPFIGLTYAIEKDFKERKKNLEAGVQSELDAIDAKYPSLPKGFTPEQWLERATAVVTELLNQKRP KLDYELGIVKNSASFDKLQASYNAIILNDQINSLQERLNKLNAETDRRRAEAEAQRQAEADAKRKAEEAARLEAQQVTQQLGADFNAITAPTATKVQQRV KAVDASLSQVSTQVSGAVASATQAVQVKTAQAQQQANSQISSSQNLISAAFRNQIALAAQASGEAQVTAFNTKVKQIVNEATAFSTARKQALAQFAANAA AEVETEVNRLTAQVKASPTKAASQAAQATLRQFTESTYAKVNTFAQQTEAALQAKAKEVSAAVAEAQRAATNDLQKTADVVPGQIIQAANTLAMPATSAP LVSVAGFGSAAVETARLAASLTNAVNRLIQIAGSGPGAYVATFAVLSLYSDQAGKDSDKVPAGVRNALALDASALGLPGTADLQSAAKAGGTVDMPVRLT SAAQESPSGKSQIAAVLTNGATVPKGVPVRAATLNTATGRYEVTVPAKSTVPNTPPLILTWTPATPPGSQNPSSTTPVVPQPVPVYEGATITPVQAEPES YPGVPLDLDDLIVIFPAGSDVPPLYLVFSKPPVKLLEVDIYGNFAGRPRDGNHLDHMPSQGALAESLLSKNPGLTYDNIRGYLKNGASVAIPARIHQKYS ETYGGRNTKERQRKDASDLRAAVDSNFDAIKGALLEQGVSEKELEIARASMHRINVEQGWYE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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