Pseudomonas aeruginosa AZPAE12417, NQ26_RS29275

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00015
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00015
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00304 HAMP_11 IPR003660 HAMP domain 166 219 6.4E-10
SUPERFAMILY SSF58104 Methyl-accepting chemotaxis protein (MCP) signaling domain - - 187 496 1.44E-77
FunFam G3DSA:1.10.287.950:FF:000001 Methyl-accepting chemotaxis sensory transducer - - 166 496 2.4E-92
PANTHER PTHR32089 METHYL-ACCEPTING CHEMOTAXIS PROTEIN MCPB - - 144 495 2.1E-104
CDD cd06225 HAMP - - 172 212 5.19778E-9
Pfam PF00672 HAMP domain IPR003660 HAMP domain 163 211 3.6E-11
SMART SM00283 MA_2 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain 234 495 6.3E-72
CDD cd11386 MCP_signal - - 261 456 4.94899E-49
Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain 303 462 6.3E-43
Gene3D G3DSA:1.10.287.950 - - - 167 496 1.1E-73

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.