Pseudomonas aeruginosa AZPAE12417, NQ26_RS28955

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE12417 AZPAE12417_contig_59, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGTGGTCATCACCAAGGTCTTCGACAAGGCCTCGCCCCTGCTGCTGGCCGCCCTGACCTCCGGCGAGCGCCTGACCAAGGTCGAGATCCAGTGGTACCGC ACCTCCGCCGCCGGCACCCAGGAGCACTACTACACCACCGTCCTGGAAGACGCGATCATCGTCGACATCAAGGACTACATGCACAACTGCCAGGACCCGG GCAACGCCCACTTCACCCACCTGGAAGACGTGCACTTCACCTACCGCAAGATCACCTGGACCCACGAAGTCTCTGGCACCTCCGGCTCCGACGACTGGCG CTCGCCGGTGGCAGGGTGAGTTGACAGGCACACCGGTCGTACACCTGTACGGCCGGTTCTCCGTCGAGCCGAAAATGTCCGCTACTTCGCGAAATAGACA CCGAGCCAAGACTTTCGGCAGCGGCTGAGCAAGAGTAACGTGGGGCTCGCTTCTCCAACGGATGGGGGAGGAACCGCCCGCCAGGAACAAGGAACGATCC
DNA Sequence for Gene
>NQ26_RS28955
ATGCGTCAAAGGGACCTGAAATTCACCTTCGTCGTCGGCGAAGGGAAACTCGCGTTCGATGTCGTCGAGTTCGAACTGGAAGAAGCGCTCTGCGAGCCTT TCCGCCTGAACCTGAAGCTGGCCAGCGACAAGAACGCCATCGATTTCAGGCAGGTACTCGACCAGCCGGGCACCTTCACCCTCTGGCAGGACGGCCGTCC GGCCCGCTACGTCCATGGCATCGTCAGCCACTTCACCCAGGGCAGCTCGGGTTTTCGCCGGACCCGCTACGAACTGCTGCTGGAACCGCAGTTGGCGCGC CTGGAGCTGTGCTGCAACTGGCGAATCTTCCAGGAGAAGAGTGTTCCGGAGATTCTCCAGGCGCTGCTCAAGGAGCACCGGGTGCTCGACTACGAACAGC GCATCTACCATGAGCACCTGCCGCGCGAATACTGCGTGCAGGCCGGCGACAGCGATCACTACCTGCACGACCGGCTGGCCTTCGAGGAAGGCCTGGTCTA CTACTTCCGCTTCGACGAACACCGCCACACCCTGGTCTGCAGCGACCGGCTCTACGTCCAGGAGCGTATCGCCGGCGGCCCGGTGCTGTTCAGCGCCCAG CCGGAGGGCGACAACCCGCAGCCGGTGCTTCATTCTTTCCGCTACAGCGAAAATGTTCGTACGGCTCGACAGACCCAGCGGGACTACAGCTTCAAGCGCC CGACCTACGACCAGGAGCATCATCTCGCTGGCGAGGCGCTCGAGCATCAGGACTCGTCCTACGAGCGCTACGACTACCCCGGTCGCTACAAGCAGAGCGG CGCGGGCCGGCCTTTCAGCGAAAGCCGCCTCAGAGGACATCGGCGCGATGCACGGGTGGCATCGGTCAGCGGCGACGACCCGCGGCTGATCCCGGGCCAC GCCTTTGCCCTGGAAGGTCATCCGCGTGCCGACTTCAACGCCTGGTGGCGGCCGGTGCGGGTGGTCCATCGCGGCACCCAGTATGCCGGCCAGGAGGAAG AGTCCGCCGACGCCCCTCTGGGGGTGAGCTACGACCTGCGCGCCGAACTGGTGCCCGAGGACGTCGAATGGCGTCCCGCACCGCTGCCTCGGCCACGTAT CGATGGTCCGCAGATCGCGACGGTAGTCGGCCCGGCAGGGGAAGAGATCCATTGCGACGAGTGGGGACGGGTGAAAGTCCAGTTCCCCTGGGATCGCGAG GGACGTCACGATGAATTCAGTACCTGCTGGATACGGGTCGCGCAGAACTGGGCAGGTGCCGACTGGGGGCACATGGCGATCCCGCGGATTGGCCAGGAGG TGATCGTCGATTACCTGGACGGCGACTGCGACCAGCCGATCGTCACCGGGCGTACCTACCGGGCGACCAACCGGCCGCCCTACGCGCTGCCCGACCACAA GATCCTCAGCACCATCAAGAGCAAGGAGTACAAGGGCAGCCGGGCCAACGAGCTGCGCATCGACGACACCACGGCGCAGATCAGTGCGGCGCTGATGAGC GACCACGGTGCCAGCGCGCTGCACCTGGGCTACCTGACCCATCCTCGGCCCGAAGGCGGCAAGCCGCGCGGCGAGGGCTTCGAACTGCGCACCGACGAAC ATGGCGCGGTGCGTGCGGCCAAGGGGCTGCTGCTGAGCACCGAGGAGCAGCTCAGGGCCGGCGCCGGCCATCTCGACCGAGGCGTCGTGGTGCAGGTGCT GGAGGCGGCGCTGGAGCTGGCCCGCGAGCTGGGCGACTACGCCGGGGAGCACCAGGGCGTGGGGCACGACGCGGCGCCGCAGCAAACCCTCCAGGAAGCC GTGCGCGACCTCGGCCACGGTGCCAACGACGAGTCCGGCAAGAGCAACGGAGGCAAGCCGGCGATCGCCTTGAGCGGTCCGGCAGGGATCGCCGCGGCGA CGCCGGCGAGCCTGACCCTGGCCGCCGGCGAGCACGTCGACAGCGTGGCCCGGCAGAACCAGCAGGTGACCGCCGGGCAGAAGGTGGTGATCAACGCCGG CAGCGACATCGGCCTGTTCGCCCAGGGCGGCGAGCTGCGCCAGATCACCCACCAGGGGCCGATGCTGCTGCAGGCGCAGAAGAACGACATCCGCCTGGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
Amino Acid Sequence
>type IV secretion protein Rhs
MRQRDLKFTFVVGEGKLAFDVVEFELEEALCEPFRLNLKLASDKNAIDFRQVLDQPGTFTLWQDGRPARYVHGIVSHFTQGSSGFRRTRYELLLEPQLAR LELCCNWRIFQEKSVPEILQALLKEHRVLDYEQRIYHEHLPREYCVQAGDSDHYLHDRLAFEEGLVYYFRFDEHRHTLVCSDRLYVQERIAGGPVLFSAQ PEGDNPQPVLHSFRYSENVRTARQTQRDYSFKRPTYDQEHHLAGEALEHQDSSYERYDYPGRYKQSGAGRPFSESRLRGHRRDARVASVSGDDPRLIPGH AFALEGHPRADFNAWWRPVRVVHRGTQYAGQEEESADAPLGVSYDLRAELVPEDVEWRPAPLPRPRIDGPQIATVVGPAGEEIHCDEWGRVKVQFPWDRE GRHDEFSTCWIRVAQNWAGADWGHMAIPRIGQEVIVDYLDGDCDQPIVTGRTYRATNRPPYALPDHKILSTIKSKEYKGSRANELRIDDTTAQISAALMS DHGASALHLGYLTHPRPEGGKPRGEGFELRTDEHGAVRAAKGLLLSTEEQLRAGAGHLDRGVVVQVLEAALELARELGDYAGEHQGVGHDAAPQQTLQEA VRDLGHGANDESGKSNGGKPAIALSGPAGIAAATPASLTLAAGEHVDSVARQNQQVTAGQKVVINAGSDIGLFAQGGELRQITHQGPMLLQAQKNDIRL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site