Strain | Pseudomonas aeruginosa strain AZPAE12417 AZPAE12417_contig_52, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
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DNA Sequence for Gene |
>NQ26_RS28150
CCGCCAGGGCACGCTCCAGGCCCAGGGCGACAACCGGCTGCGTATCGGCGGCGCGCTGGACAACCAGGGCGGCCGCCTGGACAGCCGGGCCGGCAACCTC GACCTGCAGAGCGGCAGCCTCGACAACGGCGCCGGCGGCGTGCTCAACAGCGCCAAGGGTTGGCTGAAGCTGGTCACCGGGCTGTTCGACAACAGCGCCG GCGTCACCCAGGCGCAGTCGCTGGAAATCCGCGCCGGGCAAGGCGTGCGCAACCAGCAGGGCCATCTCTCGGCGCTGGGCGGCGACAACCGCATCGTCAC CGCCGACTTCGACAACCAGGGTGGCGGCCTCTACGCCAGCGGCCTGCTCAGCCTCGACGGCCAGCGCTTCCTCAACCAGGGCGCGGCGGCGGGCCAGGGC GGCAAGGTCGGCGCCGGGCGCATCGACTTCAGCCTGGCCGGCGCGCTGGCCAACCGCTTCGGCCAGTTGGAAAGCGAAAGCGAGCTGCACCTGCGCGCCG CCGCGATCGACAACAGCGGCGGCAGCCTGCGCGCCCTCGGCCGCAGCGGCAGCACGCGGCTGGTCGCTGGCGACCTGAACAACGCCTACGGCGTGCTGGA AAGCGCCAACCAGGACCTCGACCTGCAACTGGGCAGCCTGGCCAACGCTGGCGGGCGCATCCTCCATACCGGCAACGGCACCTTCGGCCTGGATTCCGGG CAGGTGATCCGCGCCGGCGGCGAACTGACCACCAATGGCCTGCTGGACATCCGCGCCAGCGAATGGACCAACAGCAGCGTGCTGCAAGCCGGACGCCTGA ACCTGGACATCGGCACCTTCCGCCAGACGGGCGAGGGCAAGCTGCTGGCGGTGCAGTCCTTCACTGGCCGCGGCGGCGACTGGAGCAACGACGGCCTGCT GGCCAGCGACGGCAGCTTGCGCCTCGACCTGAGCGGCGGCTACCGTGGCAACGGCCGCGCCACCAGCCTCGGCGACTTCGCCCTGAACGCCGCCAGCCTC GACCTCGGCAACGCCGCCAGCCTCGCCGGCGGCGCCAATGTCACGCTCGGCGCCGGCAACCTGCTGGTCAACCGTGGGCGGATCACCGCCGCCGGCGACC TCGTGGCCAGCGCCGCGAGCCTGAACAACTACGGCACCCTGGGCGGCGGCGGCAACCTGCGATTGAACGCGCCCGCCCTGCTCAACGAGCGCGGGTTGCT GTTCAGTGGCGCCGACATGACCCTGCGCGCCGGCGACATCACCAACCTCTACGGGGATGTGTACAGCCTCGGCAGGCTGGATATCGCCCGCGACGATTCA AGTGGCAAGGCGAGTTCGTTCAAAAATATTTCAGCGAGTGTTGAAAGCTCAAATGACCTGAGATTACTTGCTGAGGTAGTTGAGAATAAAAAAGAAATTT TTGATGTTTCGTCTGAGTTTCTTTCTGGGGCTATTGGGGTTCGTTGCTTTGACTGTTCGGCAGTAGGAGGGAAAGAGGACAAGTTTGCCAGTCATTTGGT CTTGTTGGAAAATTACAAGACTCAGCTTCTAAAGGATTCTCCCTCCTCAAGTATCACCGCAGGAGGGAACATTTTCATCTTGGGGGGACGGTTCAAGAAT CAGGGGAGCACCATAGCGGCGGCGGGTGATATTTCTATTTCGGCTCAGGATTTCGCTAACGAAGGGTATGTGTTGGGTGAGTACTCCGTTAGGAAAGCAT TGGATTTCAACTACAGCTATGAGGCGAGAGTTGAGGTTTGGCGAAAAATTATGGAGTACAACTCCATAAATGACCTTGCCTATGATAATGGCAAGATTGA ATATAGTAATTTCGGTGGTGCTATACATTTCTGGAATAAAAATTGGGATGAATCCATTGTGGATTCAGTATATTTCCGAACTGGCGGAAGGGATGGTTAC TGGCACGCAGGCTTCGGGACCATTGTTATAGATGACATAGCCAGGGACAAATTTGACTATATCTCTGTTGCACCGGCTTATGACCCGTCTCGTGGAGCCT TACCACCAGATTTTCTCAGAAATGCAAAAGTATTCGATGAGCTTACTATATCGAAAAGTGATGTTGCTCCCGTCGCTAATGCAGTTGTACAGGCTGGAGG CAAAGTCTCTATCAATGCAGAGAGGTCATTGCAGAACAGTATTGTTCGAGAAGGGCAGCCCATTTCTCGGGGGGTAGAAAAGAACCTGCTAACGGGGCTG TCCGGGAACACCTCCAACGTTGTGGTGCTGAGCCAGGCACTTCCGCTTGATCTAGCCAGGAAGCAGATCAATCCGCTCACCCTACCGGGCTTCAGCCTGC CTCAAGGCCAGAATGGGCTCTTCCGCCTGGCGTCCCAAGGAGCCCAGGTGAACCAGGCAAGTGGTGCTCTGAAATCCGCCAGCGATCTCACCCAGAGCGG CCATGGCGTATCTGTATCCGCACAGGCAGGCAGTGACGCAAGTGGCTGGAGTACCCAGGCGCGTCGTGTCGGCGATGATCGGGTCACCTCGCTTACCGGT TCCGCCTATCAAGGCCGGGTAGCTGAGGCTATCGATGCGCTACGGGCTTCCGCGCCAATCTCGGGCGACGGGGGAAACACTGGCCGTTTCCAGGCCGGTG AGCACCAGGCGACCACGGGACTGGGTGGACTCGTCGAGGGCAATGCATCGGGTCACAGCGGCAATGGCGTCATCCTCGCCGATCTGCGCGCTGGTCTACC CTCGTTCTCAAGCCTTCCCGCGGCTGATCGTATTCAAAGCACAGTGCCCGGTCACGATGGGAATGGAACTATTCTCGCCAATTGGCAGGGTGCGCAGGCG ACGGTCCAGGCCTCGCCTTCGACAGTGCGTGTAGAGGGGGTAGTCTCCAGTCCAGGTGGCAATGGCAGCATCCTTGCCGGTCTGCCGGCTGAGCAGTCGT CGGTGCAGGCACTGCCTTCGGCCGTTAGGGCTCAGGGCAGCCTGCCTCGCCTCGAAGAGCGGAGCGCCGTTCTTGCCGAGCCTCCGGTTGGGCAGCCGGC GTTGCAAACCCTGCCGTCGGTTGCGCGCGTTGAGGGCGTGCCCAGCAATGCCACACCGAGCAACAGCCACAAGTATCTGATCGAGACCAACCCGGCGCTC ACCGAGCTGAAGCAGTTCCTCAACTCGGACTACCTGCTCGGTGGCCTGGGTATCAATCCGGACGATAGCAAGAAGCGCCTGGGCGACGGTCTATACGAGC AGCGCCTGGTACGCGAAGCGATCGTCCAGCGTACGGGGCAGCGCTTCATCGCCGGATTGAACAGCGACGAAGCGATGTTCCGCTATCTGATGGACAACGC CATCGCCAGCAAGGACGTATTGGGACTGACCCCTGGCGTCACCCTCAGCGCCGCCCAGGTGGCGGCGCTGACCCACGACATCGTTTGGCTGGAAGAAGTC GAGGTGAATGGCGAGAAGGTCCTCGCCCCCGTGGTCTACCTGGCCCAGGCCGAGGGGCGGTTGGGCCCGAACGGCGCGCTGATCCAGGGGCGCGACGTGA ACCTGATCACCGGCGGGGACCTGAGGAACGCCGGTACCCTGCGCGCGCAGAACGACCTCAGCGCGACAGCCGGCAACATCGACAACAGCGGCCTGATCGA GGCCGGCAACCGCCTCGACCTGCTGGCCAGCGGCTCCATCCGCAATGACCAGGGCGGCATCATTGCCGGGCGCGAGGTAAGCCTCTCCGCCCTTACCGGA GACGTCATCAATGAACGGACGGTGACCCAGCACCAGTCCTCCTACAGGGGAACCGGTACCACTGAGGCATTTGCCGATAGCGCCGCGCGTATCGAGGCTG CGCAGAAGCTGACCGTTTCGGCAGGACGCGATGTAGCCAATATTGGCGGTGTCATCGACAGCAAGGGCGACCTCGCCTTGCAAGGCGGCAGGGATGTCCT GGTTTCGGCTGCGGTAGCGGAGCGGGGCTGGACGGCAGGAAGCCAGGCATACCAGACCCAGACGACCCAGATGGGCGCCGAGGTCGTGGCGGGGCGCGAT ATCAGCGTCAGCGCCGGACGCGATATCAGCGTCGTGGGCAGCCGCATCGACGCTCGTCGCGACGTGACATTCGAGGCGGGTCGCGATGTGGGCCTGGTCG CGGCTGCCAACGAAGAGCATGCCTATGGCAAGACCAAGAAGGTCACTTTCCAGGACGACAAGATCACCCAGCAGGCCACTCGCGTGGACGCTGGCGGCGA CCTGGCGATCAATGCCGGACAGGACCTGCGCCTGATCGCGAGCCAGGCCAGCGCCGGCGACGAAGCCTACCTGGTGGCCGGCGACAAGCTGGAGCTGCTG GCCGCCAACGACAGCAGTTACTACCTCTATGACAAGAAGAGCAAAGGCAGCTTCGGTAGCAAGAAGACCCGGCGCGACGAAATCACCGATGTGACGGCAG TGGGCAGCCAAATATCCAGCGGCGGCGACCTCACCCTGCTCAGTGGCGGCGACCAGACCTACCAGGGCGCGAAGCTGGAATCGGGCAACGACCTGGCCAT CGTCAGCGGCGGCGCGGTGACCTTCGAGGCGGTGAAGGACCTGCATCAGGAGAGCCACGAGAAGAGCAAGGGCAACCTGGCGTGGCAGTCGTCGAAGGGC AAGGGCCAGACCGACGAAACCGTACGCCAGAGCCAGCTCGTCGCCCAGGGCAACCTGGCGATCAAGGCCGTGGAAGGGCTGAAGATCGACCTCAAGCACA TCGACCAGAAGACCGTGAGCCAGACCATCGACGCGATGGTGCAGGCGGATCCGCAACTGGCCTGGCTGAAGCAGATGGAGCAGCGCGGCGATGTGGATTG GCGGCGCGTGCAGGAACTGCATGACAGCTGGAAGTACAGCAACTCCGGGCTGGGCGTCGGCGCGCAGTTGGCGATAGCGATCGTCGTGACTTACTTCACG GCGGGCGCAGCCAGCGGGGCGATTGCAACGGCCGGGGCCGGAACCTCCATGGCAGGCGCGACCGCAGCCGCTACCGCTACGACTTCGGCGGGCTGGTTGA ACGCGGCAGGTACCGCAGCGCTCAGCGGCGTGGCCAGCAATGGAGCGATCAGCACCATCAACAACCGGGGAAACCTGGGGGATGTCGTCAAGGACGTGAC CTCCAGCGATGCGCTGAGGGGCTATGTAGTCGCTGGCACGACTGCGGGGCTGACTGCCGGCGTCTACGACAAATGGACCTCGACCCAGACCGGCACCTCG ACCGCTCTACCGAACACCGGGGCCGTGGCGCCCGCCGCAGGGTTGGGCACCTGGCAAGGCGTGGGCCAGTTCACCTCGAACCAGTTGCTGCAGAATGGTA CTTCGGTGCTGTTGGACCGGGCGCTGGGCGGCAAGGGCAGCCTGGGCGATGCGTTGCAAAACAGCCTGGCAAATGCCTTTGCGGCCTACGGCTTCAAGCT GATTGGCGACACCACCCATGGCGTACTGGACGACGGCAGCCTCGGCAAGATCGGCTTGCACGCCCTGATGGGAGGTCTGGCCGCCGAAGCGGTCGGTGGC GATTTCCGTACCGGAGCCCTGGCTGCGGGAGTCAACGAGGCGCTGGTGAATAGCCTCGCCAAGCAATACGCCAGCCTGCCCATCGATGACAAGAAGGGCC TGCTGATCATGAGTTCGCAGTTGATCGGCGTGCTGGCGGCTTCGACGCAGGGCGATGCGGACGCCAAGAGCTTGCAGACGGGAGCCTGGGTGGCGGGGAA TGCCACCCAACACAACTACCTCAGTCATTGGCAGGAGGAAAAGAAGCGGCAGGAGGTCGATGGCTGCAAGGACAAACAGCTCTGCAAAACCGGAATAGAA GCCAAATGGGCAATTATTTCGGCCCAGCAGGATGTCGGTATCGTCGTAGGTGTTGGAGGAGGCATTGGTCTTTCGACAGCTGAAACCGCAGTGGGTGTTT ATGAGCTGGTCAAGAACTGGAGGGAAACCTATGCAGCTCTGGAGCAGTTGGCCACTTCGCCAGAGTTCCGGCAGCAGTTTGGCGATAACTACCTGAAGGG GCTGGAGGAGCGCGCCGCATTCTTGACCCAGGCATACGAGGATGCCGGCTGGCAAGGTTCGGTCACAGCTGGTGTCGAGGGCGGTAGGTTCGCTGCGGAA CTTGTTGGCGTTCTGACGGCAGTGAAAGGTGGCGCGCAGATAACCGCCAAGCTGCCAACAGCAGCCAAGAACCTGGTCAACGCGATTGCGGAGTCACCTG TTTCCGGTAGTATGAGTTCGCAACTCGGGGCAGTGGGGGACTTGGGTCGGCTGGGTGGGGGGGCAAAAGGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTTCAAAAACTTCCTGAACTCGGTGGGGTTGATACATTTCTTAGCTCCCAAGCAGCAAATTTAAACAAGAAGTTGGGTGCGAAAATAGGTGAAGGCAGAC TGCCTTACGAGGCCAGTCGCGCTGGTGTTGAGCAGGCCAAGCTAGCAGTTAAAGAAACATTGGAGAACGCTACCGCTGTTAGTGACATAATTCCTAAGTC GGCTGTCCGAGGGAATTATGACCTTGTTCATGTTTACAGCTCTAAAACTAATAGCACTGTTAGCCTACGAGTGTTGCCCGGCGGAAAATATGAATTCGAC ACTTTGATTTCAGAGAAATCCTCAAAATTTTAGTCGCGGGGTTTGGCCTTATGATCATTGGTGAGAAGATTTTTGAGTTTAGATTTCGGTCGTTCTTTAT GTCGGGGTCTTTGGTTTGTAAAATGTTGGTTCTGTTTCTTAGGTTTTCAAGATCGGGATGGGTTTCATTAGATATTGGGGAAGGTGTGTTAAGGATTTTG
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Amino Acid Sequence |
>hypothetical protein
RQGTLQAQGDNRLRIGGALDNQGGRLDSRAGNLDLQSGSLDNGAGGVLNSAKGWLKLVTGLFDNSAGVTQAQSLEIRAGQGVRNQQGHLSALGGDNRIVT ADFDNQGGGLYASGLLSLDGQRFLNQGAAAGQGGKVGAGRIDFSLAGALANRFGQLESESELHLRAAAIDNSGGSLRALGRSGSTRLVAGDLNNAYGVLE SANQDLDLQLGSLANAGGRILHTGNGTFGLDSGQVIRAGGELTTNGLLDIRASEWTNSSVLQAGRLNLDIGTFRQTGEGKLLAVQSFTGRGGDWSNDGLL ASDGSLRLDLSGGYRGNGRATSLGDFALNAASLDLGNAASLAGGANVTLGAGNLLVNRGRITAAGDLVASAASLNNYGTLGGGGNLRLNAPALLNERGLL FSGADMTLRAGDITNLYGDVYSLGRLDIARDDSSGKASSFKNISASVESSNDLRLLAEVVENKKEIFDVSSEFLSGAIGVRCFDCSAVGGKEDKFASHLV LLENYKTQLLKDSPSSSITAGGNIFILGGRFKNQGSTIAAAGDISISAQDFANEGYVLGEYSVRKALDFNYSYEARVEVWRKIMEYNSINDLAYDNGKIE YSNFGGAIHFWNKNWDESIVDSVYFRTGGRDGYWHAGFGTIVIDDIARDKFDYISVAPAYDPSRGALPPDFLRNAKVFDELTISKSDVAPVANAVVQAGG KVSINAERSLQNSIVREGQPISRGVEKNLLTGLSGNTSNVVVLSQALPLDLARKQINPLTLPGFSLPQGQNGLFRLASQGAQVNQASGALKSASDLTQSG HGVSVSAQAGSDASGWSTQARRVGDDRVTSLTGSAYQGRVAEAIDALRASAPISGDGGNTGRFQAGEHQATTGLGGLVEGNASGHSGNGVILADLRAGLP SFSSLPAADRIQSTVPGHDGNGTILANWQGAQATVQASPSTVRVEGVVSSPGGNGSILAGLPAEQSSVQALPSAVRAQGSLPRLEERSAVLAEPPVGQPA LQTLPSVARVEGVPSNATPSNSHKYLIETNPALTELKQFLNSDYLLGGLGINPDDSKKRLGDGLYEQRLVREAIVQRTGQRFIAGLNSDEAMFRYLMDNA IASKDVLGLTPGVTLSAAQVAALTHDIVWLEEVEVNGEKVLAPVVYLAQAEGRLGPNGALIQGRDVNLITGGDLRNAGTLRAQNDLSATAGNIDNSGLIE AGNRLDLLASGSIRNDQGGIIAGREVSLSALTGDVINERTVTQHQSSYRGTGTTEAFADSAARIEAAQKLTVSAGRDVANIGGVIDSKGDLALQGGRDVL VSAAVAERGWTAGSQAYQTQTTQMGAEVVAGRDISVSAGRDISVVGSRIDARRDVTFEAGRDVGLVAAANEEHAYGKTKKVTFQDDKITQQATRVDAGGD LAINAGQDLRLIASQASAGDEAYLVAGDKLELLAANDSSYYLYDKKSKGSFGSKKTRRDEITDVTAVGSQISSGGDLTLLSGGDQTYQGAKLESGNDLAI VSGGAVTFEAVKDLHQESHEKSKGNLAWQSSKGKGQTDETVRQSQLVAQGNLAIKAVEGLKIDLKHIDQKTVSQTIDAMVQADPQLAWLKQMEQRGDVDW RRVQELHDSWKYSNSGLGVGAQLAIAIVVTYFTAGAASGAIATAGAGTSMAGATAAATATTSAGWLNAAGTAALSGVASNGAISTINNRGNLGDVVKDVT SSDALRGYVVAGTTAGLTAGVYDKWTSTQTGTSTALPNTGAVAPAAGLGTWQGVGQFTSNQLLQNGTSVLLDRALGGKGSLGDALQNSLANAFAAYGFKL IGDTTHGVLDDGSLGKIGLHALMGGLAAEAVGGDFRTGALAAGVNEALVNSLAKQYASLPIDDKKGLLIMSSQLIGVLAASTQGDADAKSLQTGAWVAGN ATQHNYLSHWQEEKKRQEVDGCKDKQLCKTGIEAKWAIISAQQDVGIVVGVGGGIGLSTAETAVGVYELVKNWRETYAALEQLATSPEFRQQFGDNYLKG LEERAAFLTQAYEDAGWQGSVTAGVEGGRFAAELVGVLTAVKGGAQITAKLPTAAKNLVNAIAESPVSGSMSSQLGAVGDLGRLGGGAKG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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