Strain | Pseudomonas aeruginosa strain AZPAE12417 AZPAE12417_contig_50, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ATCTCGGCCTGGCTCATGCGCTCGGCGGCCAGTCGGCAGGCCATGCCTTCCAGGGACTCGCGGATTTCGTAGAGCTCGATCAGCTCGGCGTGGCTCAGCG ACACCACCCGCGCCCCGACATGCGGCACCCGCACCAGCAGGCGCAGGCCTTCCAGGCGGTGGATCGCCTCGCGCAGCGGGCCGCGGCTGATGCCGTAGGT GCGCGCCAGCTCCGGCTCGGAGATCTTGCTGCCCGGCGCGATCTCGCCGCTGACGATGGCGCTCTGGATCTTGCGGAAGACGTGTTCCGACAAGGTCTCG CCGTCGTCATGGGCAATCTCGAGAGGGGGCGGGTTCTGGGTCATGGTACTGGCTGTCCGGGTCGATGTGTCGACAATGTTTGCGAAAGCTACCGCCTGGA TTGCGTGGGGTCAATCATTCGTCGCTTAATTGTCGACAATCGTCTAATGCATCGCTGGTCTATGCTTTCCCCTCCAGCCGCTGTGCCAGGAGAGAGTTTC
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DNA Sequence for Gene |
>NQ26_RS27345
GTGGGCATCTATGACCGTTACGTGTTGCCGCGCCTGATCGACTTCGCCTGCGGCATGGGCGACGTGATGAAGCAGCGTTCGCTGCTGGTGCCGCGCGCCC ATGGGCGGGTGCTGGAGATCGGTCTGGGCACCGGGCTCAACCTGGGCTTCTACGACGCGGCGAAGGTGTCGGCGATCGTCGGCGTCGACCCGGCCGCGCA AATGCAGGCGCTGGCCCGCGAGCGCGCGGCGCAAATCGGCATCCCGGTGGAAATGGTCGCCCTCGAGCTTGGCGAGATCCGCGCCGAGGCGGAAAGCTTC GACACCATCGTCTGCACTTTCACCCTTTGCTCCATCGCCGCGCCGCTGCCGGCGCTGGGCGAGATGCGTCGGGTGCTGAAGCGTGGCGGCGAATTGCTGT TCTGCGAGCATGGGCGCGCGCCGGACGCCTCGGTGCTGGCCTGGCAACGGCGCCTGACGCCCTGGTGGAAACCGCTGGCCGGCGGTTGCCACCTGGACCG CGACATGCCGGCCTTGCTGCGCGAGGCCGGCTTTCGCATCGACGAGCTGGAACAGGGCTACCTGCCCGGGCCGCGGCCGATGACCTACGTCTACCGCGGC GTCGCGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ATCCGGGCGGCCCTCAGAGCGCCTTGGGCAAGGGCGCGAACAGCGCGTCGATATCGGCCTCGTCGAGCTTCCAGCCGTCGCCGTTGCCTTCGCTGAACAG GCCGTCGGCGAGGGCGGCCTTTTCCTGCTGCAGGTGCTGGATCTTCTCTTCCACCGTGCCGCGGGCGATCAGCCGGTAGACGAACACCGGCTTGTCCTGG CCGATGCGGTAGGCGCGGTCGCTGGCCTGGTTCTCCACCGCCGGGTTCCACCAGGGATCGTAGTGGATCACGGTGTCCGCCGCGGTCAGGTTGAGGCCGA CCCCGCCTGCCTTCAAGCTGATCAGGAACACCGGCACCTTGCCGCTCTGGAAGCGCTGTACCGGGGCGCGGCGGTCGCGGGTCTCGCCGGTCAGCAGGAC GTAGTCGACGCCGCGCTGGCGCAGGGCGTCCTCGATCAGCGCGAGCATCGAGGTGAACTGCGAGAACAGCAGGACCCGGCGACCCTCGGCGATCAGTTCG
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Amino Acid Sequence |
>phospholipid methyltransferase
MGIYDRYVLPRLIDFACGMGDVMKQRSLLVPRAHGRVLEIGLGTGLNLGFYDAAKVSAIVGVDPAAQMQALARERAAQIGIPVEMVALELGEIRAEAESF DTIVCTFTLCSIAAPLPALGEMRRVLKRGGELLFCEHGRAPDASVLAWQRRLTPWWKPLAGGCHLDRDMPALLREAGFRIDELEQGYLPGPRPMTYVYRG VAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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