Strain | Pseudomonas aeruginosa strain AZPAE12417 AZPAE12417_contig_31, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AGTTCGATGGATGCTTCGGGGTGCCAGCGGCGAAAGCGTTGCAGGACGCGTGGCAGCCAGGCGCTGGCGAAGTCCTCCGAAGCGCCGATGCGCAGGCGGT CGCGGATCGGCGTGCCGTGCAGCCTGGCGCGGGCCTCGCGCTCCAGCTCGACGATATTGCGGGCATAGGCGTAGAGCGTCTCGCCCGCCTGGGTCAGCTC CAGGCGGCGGGTGGTGCGGCTGAGCAGGCTGACGCCGGCTGTCTGTTCCAGGCGCTTGATATGCCCGCTGACCGCGGAGGGAGTGAGCGCGAGATTGTCC GCGGCGAGGGCGAAGCCGCCACTGTCGACCACTTCGAGAAAGGTACGCAACAACACGATATCCAAGGATTGGGAGGTGGGGACGGCAAGCTCCATGAGGT CTTCCATTCATCTCGTTTCATGAATAGTAGACGCTAACTATTCATGAATCACGCTTGGCAAGCGTCCTAGGATGTCCCTTCTTTCTCTTGGAGAGGTCCG
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DNA Sequence for Gene |
>NQ26_RS22720
ATGAGCCGCTATGCCTTCGTTTCCACCGATGTCCTGGATATCGCCTACCTGGAGTGGAATCCGCAGGGGGCGCGCAGCGCCGTCTTGTTGCACGGTTGGC CGGACAGCCCGCATGCCTGGAGAGACCTGGCGGAGTCCCTGGCGGACGCCGGCTATCGGGTGCTGGCACCAGCCCTCCGGGGATTCGCCCCGACCCGCTT CCGCGATGCGTCTACTCCGCGCAGCGGGCAACTGGCGGCTCTGGCTTGCGATCTGCTGGCATTCGTCGACAGCCTGGCATTGCAACGTCCCCTGCTGGTC GGCCATGACTGGGGGGCTCGCGCGGTGGCTAGTGCCTGCGGACTGCGCGAGGGCCTAGCCTCGCACCTGGTGATGCTCTCGGTGGGGTACGCCAGCAACG ATCCGCAGCAAGTTCTTTCCCTGCCGCAGGCCCGTAGCTTCTGGTACCAGTGGTTCATGGCTACGCCACGCGGAGAGCGCGCGCTGCGCGAGGAGGGCGA GGCGTTCGCCCGGCAGATGTGGGACACCTGGTCGCCGCCGGGATGGTATGCCGAGCGCGATTTCCAGGAGGCCGCCCAGGCCTTCTCCGGGCCGGACTGG GTCGCCGTGGTGCTGCACTATTACCGGCATCGCTGGGGCTTCGTCGCGGGGGAGCCGCGCTACGGGGCGGCGGAACAGCGCTTGCTCCCGGCACCGCGCC TGGCGCTGCCGACCCTGGTGCTGCACGGCGGCGCGGATGCCTGCACCCACCCCGACGGCTCCCGCGGACGCGAGCACTACTTCAGCGGGCGCTACCAGCG GCTGGTGCTGGAGAGCGTCGGCCATTTTCCGCAGCGCGAGGCGGCCGCCCAGGTGGCGGACGCTATCCTGCGGTTCTGCGCGGATGACTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTCCTGGACACCGCAGCGGCGGATAACGCCCATGGCGTTATCCGCCCTACGAACCGGTGTGCCGCGAACGGTCGCGGCGGACGTGGGGTCGTAAGCTCCG CCGGCGGCCCTATGGCGTCCGCAGGCGGTCGAGCAGCGCCGGGGTCGGATAGCCGTCCGCCGGCCAGCCGAACTCCTGCTGGCAGGCGCGGATCGCCTTG CGCGTATTGGCGCCGATGATGCCATCCACCGCGCCCGGATCGTGTCCGCGGGCGGCCAGTTGCCGTTGCAGCTCGATGCGCTGCGAGCGGCTCAGCGGAA CATCCTCCAGCGGCCAGGCGCCGACTATCCGGCCGCCGCCCTTGAAGCTGTCGGCGAGCAGGCCGACGGCCAGGGCGTAGGCGCTGGAGTTGTTGTACTT GAGGATGGCGCGGAAGTTGTGCAGCACCAGGAAGGCCGGGCCGCGGTGCCCGGCCGGCAGCAGCAGCGAGGCCTGTTCGCCGGAGAGTCCGGAGGGCAGG
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Amino Acid Sequence |
>alpha/beta hydrolase
MSRYAFVSTDVLDIAYLEWNPQGARSAVLLHGWPDSPHAWRDLAESLADAGYRVLAPALRGFAPTRFRDASTPRSGQLAALACDLLAFVDSLALQRPLLV GHDWGARAVASACGLREGLASHLVMLSVGYASNDPQQVLSLPQARSFWYQWFMATPRGERALREEGEAFARQMWDTWSPPGWYAERDFQEAAQAFSGPDW VAVVLHYYRHRWGFVAGEPRYGAAEQRLLPAPRLALPTLVLHGGADACTHPDGSRGREHYFSGRYQRLVLESVGHFPQREAAAQVADAILRFCADD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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