Pseudomonas aeruginosa AZPAE12417, NQ26_RS02275

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE12417 AZPAE12417_contig_3, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATGTTTCACACGCCGATCATCTTCGTCGGGCACTCTGGAAACCTCTCTCTTCGCGGAGCGGCATCCGGTGAGGCGACCCCGGCAAGGCGGTTTCACCCTG ATCGAACTGATGGTGGTGCTGGTAATCGTCGGCATCGCCACGGCGGCCATCAGCCTGAGCGCCCGCCCCGACCCGACGGGCCTGCTGCGCCAGGATGCCG CGCGCCTGGCGCGGTTGCTGGAAATAGCCCAGGGCGAAGCGCGGGTACGCGGTACGCCGATCCTCTGGCAGCCCAGCGCCAAGGGCTATCGCTTCAGCCC GCAGGCCTATCGCGGCAAGACCGACGCCTTCGCCGCCGACACCGAATTGCGCGCGCGCGACTGGCAGGCCGCGCCGCTGCGGGTCAGCGTGCGCCCGCCG CGACCGGTGTTGCTGGACGCCGAATGGATCGGCGCGCCGTTGCGGATAACGCTCTCCGACGGCCAACACAGCGTCACCGTGCTGCGCGAGGCGAACGGCC
DNA Sequence for Gene
>NQ26_RS02275
ATGTCCGGGTACGCTGAACGCGCGACGACGCGGCGCCGGCAAGCCGGCTTCACCCTGATCGAGGTGATGGTCGCGATCATGCTCATGGCCATCGTCAGCC TGATGGCCTGGCGCGGCCTGGACAGCATCGCCCGGGCCAGCGCGCACCTGGAGGACAGCACCGAGCAGGGCGCCGCGCTACTGCGCGCGCTGAACCAACT GGAGCGCGACATCGCCCTGCACAGCGCCATCCGGGAGGAGACCGGCCTGCCCAGCGGCGACGAGCCGATCCGGGCCGGCGACAGCCTGCCGCCCGGACTC GCACTGAAGCGCCTGAGCGAGATCCCATTGCGCCTGGACATCGTCCGCGCCAGTACCGAGCCAGGCGCGCCGCTGCAGCGCGTGCGCTGGTGGCGACAGG GCAAGGTCCTCTACCGCGCCGCCTCGCCCAGCGGCGACCGCCTGCCGTTGCCGCCGCTGGCGGAGCGGGTGGCTGTGCTGGACGACGTGAGTCGGTTCGA GATCCGTGCCTGGGTGCCGGGAAAGGGCTGGGCGCGCCTGCCGGCACGCAGCAAAGTCCGCGCCAGCGGACTGGAGATCAGCCTGGCGCGGGTCACCCGC AACGGCGTGGAGCGCTATCGACGGGTGGTGGCCCTGCAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGCGGTGGCTCAGCCGAGCAGCACCACCCCGCCCGGCAGGCGGGTGACCTCGATGCCATAGGCATCGCGGATCAGGGTCGCCACGTCGGCCAGTTGATCG AGGCTGAAACGGGCCTGGACCCGACGTCGGCCAAGGGCCTTGTCCAGCAGCAGGAGCATGCCGGGACGGTAGCGGTTGATTTCGTCGATCACCGTGGCCA ACGGTACGTCGTTGAACACCAGCATGCGCTCGCGCCAGGCCATCACCTCGGCAACGTCGAAAGGCACCGGCGGACCGTTGCGTCGCTCGTCGAAGGTCAG CTGCTGGCCGGCCTGGAGGTCCAGGCGCTGGCCGAGGTGTTCGAGCCGCACGCTGCCCTCCAGGCAGGTCACCACGCAGACGTCACCGCTGCTGCGCACA TTGAAGCGGGCCCGGCTGGCGCTCAGCCAGGCGCTCCCGGCCATCACCCGCAGGCTGCTCTGCGGCGGGTGGCTGGCGATGATCTCGGCCTCGCCGCCGA
Amino Acid Sequence
>type II secretion system protein J
MSGYAERATTRRRQAGFTLIEVMVAIMLMAIVSLMAWRGLDSIARASAHLEDSTEQGAALLRALNQLERDIALHSAIREETGLPSGDEPIRAGDSLPPGL ALKRLSEIPLRLDIVRASTEPGAPLQRVRWWRQGKVLYRAASPSGDRLPLPPLAERVAVLDDVSRFEIRAWVPGKGWARLPARSKVRASGLEISLARVTR NGVERYRRVVALQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site