Pseudomonas aeruginosa AZPAE12417, NQ26_RS20325

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE12417 AZPAE12417_contig_27, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCGAAACCAGCACCTTGCCGACGCCGAGCGCACGCATCACCTCGCCGATCCCCACCGGCGGGATGTAGGAGCGGGCGTCGTTCATCCAGCCGCGCATCGC CGGGTCCAGCGACAGGTACTCGTTCTTCACCAGGATCTGGCCCTCGGCCGGTTCGCCGAGCGGGGTTTCGACGAAACTGAAGGTGTCGCGGCCGGGCAGC CCGCTGGGACGCTGGGCCAACTGGTATTGCCGATTGATCTGGGAGGTCATGGCAGGGCACTCGAATGTCGGGAAACAGGCCCCTAGGGATAGCTGGCGCC GGCGCCGGCGGCAAGCGAAGGCGAGTGCGGAAATGACCGGTCATCTATGCCGATGATTCGCCGCCATCAGTCTTATCAGCGGGCTGGATGGCCCATCCTC CAGTCCCCTGATAGTGCTATGCCTTGCGCCGGCCCTGGCTAGACTGGCGCGGCCCGGTTCCGTCGCGGTTGGCGGAAGGCGATTTTCCGAGGAGCAGCAG
DNA Sequence for Gene
>NQ26_RS20325
ATGAGCAAACTTCTTTCCGGCCAGGTCGCACTGGTCACTGGCGGTGCGGCGGGCATCGGCCGCGCTACCGCGCTGGCCTTCGCCGCCGCCGGGGTCAAGG TGGTGGTCGCCGACCTGGACAGCGCCGGCGGCGAGGGCACGGTCGAGGCGATCCGCCAGGCGGGAGGCGAAGCCCTCTTCATTCGCTGCGACGTCACCCG CGACGCCGAGGTCAAGGCGCTGGTAGAGGGTTGCGCAGCGGCCTACGGCCGTCTCGACTATGCCTTCAACAACGCCGGTATCGAGATCGAGCAGGGCAAG CTGGCCGACGGCAACGAAGCCGAGTTCGACGCCATCATGGCTGTCAACGTGAAGGGCGTCTGGTTGTGCATGAAGCACCAGATCCCGCTGATGCTGGCCC AGGGCGGTGGCGCGATCGTCAACACCGCCTCGGTCGCCGGGCTCGGCGCGGCGCCGAAGATGAGCATCTACGCTGCTTCCAAGCACGCGGTGATCGGCCT GACCAAATCGGCGGCGATCGAGTACGCGAAGAAGGGCATCCGCGTCAACGCCGTGTGTCCGGCGGTGATCGACACCGACATGTTCCGCCGCGCCTACGAG GCCGATCCGCGCAAGGCCGAGTTCGCCGCCGCGATGCATCCGCTGGGTCGGGTCGGGCGGGTCGAGGAAATCGCCGCCGCGGTGCTCTATCTGTGCTGCG ACAACGCAGGCTTCACCACCGGTATCGCCTTGCCGGTGGACGGCGGGGCGACGGCGATCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGGGCGGCGATACAACCGGGATGCCCCGGCGCGGGGCATTCGCATTCTGTTACAGGTCGGCACGCGGTTTGGCGCGCCAGGCCACTGCCGGGGGACTAA CCTGGGTCGAGAATCCGGGGCCTGAGCCCGTCTCCATCGCATCGGAGCAATAACAATAATGACCGCCGATCCCATCCTGACCCTGTTCCTCCCCATCGCA CTGGGCATCATCATGCTCGGTCTCGGACTGTCCCTGACCCCGGCCGACTTCCTCCGCGTGGTGCGCTACCCGAAGCCGGTGCTGGTCGGCCTGGTGTGCC AGATCGTCCTGCTGCCCCTGGCCTGTTTCCTGATCGTCCAGGGCTTCGCCCTGGAGGCGGCCCTGTCGGTCGGCATGATGTTGCTGGCGGCCTCGCCCGG CGGCACCACCGCCAACCTCTACAGCCACCTGGCGCATGGCGACGTGGCACTGAACATCACCCTGACCGCGGTGAACTCGGTGATCGCCATCCTCACCATG
Amino Acid Sequence
>short-chain dehydrogenase
MSKLLSGQVALVTGGAAGIGRATALAFAAAGVKVVVADLDSAGGEGTVEAIRQAGGEALFIRCDVTRDAEVKALVEGCAAAYGRLDYAFNNAGIEIEQGK LADGNEAEFDAIMAVNVKGVWLCMKHQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYE ADPRKAEFAAAMHPLGRVGRVEEIAAAVLYLCCDNAGFTTGIALPVDGGATAI
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site