Pseudomonas aeruginosa M18, PAM18_3411 (kdpD)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa M18 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TCGCGGCTGATCGCGCAGAAGTTCAACGGCGAGGAGTGGTTCCATTCGCGGCCTTCGGCGGGCGACTACGCCACCGTTTCCAGTGCCGCGAGCAACCTGG CGCCGAGCAACCCGGCACTGGCCGAGCGCATCGCCAGGGACGCCGCCCAGGAGCGTATCGCCGACCAGGGGCCGGTGCCGCTGGCGCTGGTCACTACCTC CGGTAGCGGACTCGATCCGCAGCTGCCGCCGCAGGCCGCGCGTTACCAGGCGCTGCGGGTGGCCACGGCGCGCGGGCTGCCGCTGCGGCTGGTGGAAGAC CTGGTGGAAAGCCACACCGAGCGGCCGCTGGTGGGGCCGGCGGTGGTCAACGTGCTGGCGCTGAACATGGCGCTGGCGGGGTTGAAGCGCTAGGTTTCCC CAGAGACCCACGCAAGGGCTTGCAATATCGCCGCATCGGCGGATGATCGCCGGCGATCGTCCGCCCTGCGCGGCGCAGAGCAACGGAGTACGACCGATCC
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| DNA Sequence for Gene |
>PAM18_3411
|kdpD
ATGACCGACACCGCACGCGCCGACGCGCTGCTGGCCGACCTGCCCGCTGACGGGCGCGGCCGCCTGAAAGTCTTTCTCGGCGCGGCGCCGGGGGTGGGCA AGACCTTCGCCATGCTGCAGGCCGCCCAGGCCCAGTTGCGCCAGGGCGTGAAACTGCGCGCCGGGGTGGTCGAGACCCACTCGCGGGCGGAAACCGAGTC CCTCCTCGCAGGCGTGCCGCAGCAGCCGCTGCGCAGCCTCGAGTATCGAGGGATGAAACTGCAGGAAATGGACCTCGACGGTCTCCTTGCCGACCCGCCG GCGCTGGCCCTGGTCGACGAACTGGCCCACAGCAACGTTCCCGGCAGCCGCCACGCCAAGCGCTGGCAGGACATCCAGGAGTTGCTGGCGGCGGGAATCG ACGTCTACACAACGGTCAACGTCCAGCACCTGGAGAGCCTCAACGACCAGGTCCGCGACATCACCGGCGTGCAGGTCCGCGAGACGGTGCCGGACTGGGT GTTGCAGGAGGCCTACGAGATCGTCCTCATCGACCTGCCGCCGCGCGAGCTGCTGGAGCGCCTGCGCGAGGGCAAGGTCTACGTGCCGGAACAGGCGCGG GCGGCGATCGATGCGTTCTTCTCGCAGACCAACCTCACCGCGCTGCGTGAACTGGCGATGCAGACCGCCGCCGCGCGGGTCGACGCCGACCTCAACCACC GCTACCGCCAGCGCGGCGAGGAAGCGCCGGCGTTGCGCGGGCGGCTGCTGGTGGGCATCGACGGTGACGAACAGGCCGAACGCCTGGTGCGCCACGCCTG CCGGGTCGCCGAACGTCGGCACCTGCCCTGGAGCGTGGTACACGTCGATACCGGCGGCTTGCGCGGCGAGCAGGCGCGGATGCGCCTGCAGGGTGCGCAG CAACTGGCCGAGCGGCTCGGCGGCGAGATCGTCGTGCTGCGCGCCGGCGAGGTGGCGCGGACCCTCCTGCAACATGCCCGCGAGCGCCGCGCCAGCCTGG TCCTGGTTGGCCAGTCGCGGCGCCGCTGGTACCGCCGGGCCTTCGGCGGTGGTCTCGCCGGGCGTCTGCTGCGCGACGGCCAGGGCCTGGAGATCAGTGC CCTGGACAGCGAGGCCGACCTGCGCCCGGCGGAACCGCGGCCACGCTATCCGGTGGTGTGGAACGACTATCTGCTGGCGCTGCTGGCGACCGCCCTGGCC AGCGGCCTGGCCTGGATCGTGGCGCACCTGCTGGAGCTGCCGAACATCTCCCTGGTGTTCCTGATGGCGGTGCTGCTGGTGGCAGTGCGCAGCAGCCTGA TGCCGGCACTGCTGTGCGCGGTGGCGTCGTTCCTGGCCTATGACTTCCTGTTCATCCCGCCGCATTTTTCCTTCGCCATCCATCGCCACGAAGACCTGCT GAGCCTGGCGTTCTTCCTGTTCATGGCCGGCCTCACCGGCAACCTGGCGGCACGCCAGCGGCGCCAGCTGGAGGCGCTGCGCGATACCCAGGAGGAAACC AGCCTGCTGCTGGAGCTGTCGCGCAAGCTCACCGCCGCCACCGACCGCCAGGCGGTGCTGGCCGCCGCCGCCCAGCAGTTCGACGACTGGAAGGACGTCG AGGTCTGCCTGCTCGGTCAGGTCAATGGCGAGTGGAAGACCGGGGCCGGCGTGCAGCGGCAACTCGCCGACCAGGAACGGGTCGCCGCGGACTGGGCCTG GGCCCACGACCAGCCGGCCGGCCTCGGTACTGGCACGCTGCCCGGAGGACGCTGGTGGTGGTGGCCGCTGTCGGCGGAAGAGGGACCGCTGGCACTGCTC GGTGTCGCGCCGCTTGACGGCCAGCCGCTGAGCCCGCAGCGCCGGCGCCTGCTCGCCGCCCTCGGCCAGCCCCTGGCCCAGGCCCTGGCGCGGGCTCGCC TGGCCGAGGACCTGGAGGCCGCGCGCCTGCACGGCGAAACCGAGCAACTGCGCAGCGCCTTGCTCGCCTCGGTCTCCCACGACCTGCGCACGCCGCTGAC GGCCATGCGCGGCTCCATCGACAGCCTGCTGGCGCTGGGCGAGGCGATCCCGCCGGCGGATCGTCGCGAACTGCTGGAAAGCACCCGCGACGAGGCCGAG CGACTGGACCGCTATATCCAGAACCTGCTCGACATGACCCGTCTCGGCCACGGTGGCCTGAAGCTGGCGCGCGACTGGGTGGCGCCGGGCGACATCGTCG GCAGCGCGCTGAACCGCCTGCGCGCGGTGCTGGCGCCGTACCGGGTGCAGGCGATCGTGGCCAACGACCTGCCGTTGCTCTACGTGCATGCGGCGCTGAT CGAGCAGGCGCTGATCAACGTGCTGGAAAATGCCGCGCGCTTCTCGCCGAACCACGGCCGGTTGCGCATCGAGGTCAGCCAGGATGCCGCCGAGCTGCGT TTCGCGGTGAGCGACGAGGGGCCGGGGATTCCCGAGGCCGAGCGGGAGAAGATCTTCGACATGTTCTACACCGCTGCCCGTGGCGACCGCGGTGGCCAGG GCACCGGCCTGGGCCTGGCGATCTGCCAGGGCATGATCGGCGCCCACGGCGGGCGCATCAGCGTCGGCGAAGGCCTCGACGGTCGCGGCACCACGCTGGT CCTGCACCTGCCGCTGCATCCGCAGCCGGACCTCGGGCAACTGGAGGGCGACGAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCCGGCGCACTTGCCTGGCGCCCGCGCTCGCGCTATTCCTGCCGGTTCCGCGACGCCGCTGCTGGCCTGTCGCCGTGTTCACCTGCCGTGCCGAGTGCC ATGACCCAATTGCAGAACAGCATCCTGCTGATCGACGACGAACCGCAGATCCGCAAGTTCCTCCGTATCAGCCTCAATGCCCAGGGCTACCGGGTGCTCG AGGCCGGCACCGGCGAAGAGGGGCTGGCCCAGGCCGCGCTGAACCGGCCGGACCTGGTGGTGCTCGACCTCGGCCTGCCGGACCGCGACGGCCAGGACAT CCTTCGCGACCTGCGCGAATGGTCGCAGGTGCCGGTGCTGGTGCTGTCGGTGCGCGCCAGCGAGGGCGAGAAGGTACTGGCCCTGGATGGCGGCGCCAAC GACTACGTGACCAAGCCGTTCGGCATCCAGGAGTTCCTCGCCCGCGTGCGCGTCCTGCTGCGCCAGGCGGCGCAGGGCGAAAGCCCGGAGGCGTCGGTGG
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| Amino Acid Sequence |
>two-component sensor KdpD
MTDTARADALLADLPADGRGRLKVFLGAAPGVGKTFAMLQAAQAQLRQGVKLRAGVVETHSRAETESLLAGVPQQPLRSLEYRGMKLQEMDLDGLLADPP ALALVDELAHSNVPGSRHAKRWQDIQELLAAGIDVYTTVNVQHLESLNDQVRDITGVQVRETVPDWVLQEAYEIVLIDLPPRELLERLREGKVYVPEQAR AAIDAFFSQTNLTALRELAMQTAAARVDADLNHRYRQRGEEAPALRGRLLVGIDGDEQAERLVRHACRVAERRHLPWSVVHVDTGGLRGEQARMRLQGAQ QLAERLGGEIVVLRAGEVARTLLQHARERRASLVLVGQSRRRWYRRAFGGGLAGRLLRDGQGLEISALDSEADLRPAEPRPRYPVVWNDYLLALLATALA SGLAWIVAHLLELPNISLVFLMAVLLVAVRSSLMPALLCAVASFLAYDFLFIPPHFSFAIHRHEDLLSLAFFLFMAGLTGNLAARQRRQLEALRDTQEET SLLLELSRKLTAATDRQAVLAAAAQQFDDWKDVEVCLLGQVNGEWKTGAGVQRQLADQERVAADWAWAHDQPAGLGTGTLPGGRWWWWPLSAEEGPLALL GVAPLDGQPLSPQRRRLLAALGQPLAQALARARLAEDLEAARLHGETEQLRSALLASVSHDLRTPLTAMRGSIDSLLALGEAIPPADRRELLESTRDEAE RLDRYIQNLLDMTRLGHGGLKLARDWVAPGDIVGSALNRLRAVLAPYRVQAIVANDLPLLYVHAALIEQALINVLENAARFSPNHGRLRIEVSQDAAELR FAVSDEGPGIPEAEREKIFDMFYTAARGDRGGQGTGLGLAICQGMIGAHGGRISVGEGLDGRGTTLVLHLPLHPQPDLGQLEGDE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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