Strain | Pseudomonas aeruginosa strain AZPAE12417 AZPAE12417_contig_22, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GAGCGTCGCCGGCATCGCCACGCTGGGCCCGCTGCTGGCGGCGATCACCCCGACCCTGCTGAACTTCCTGTTCGGCATCGTCGCCGGCGCGGTGGTCCTG GCGGTGGTGCTGCTGGTCAAGCGCCTGCTGCCGAAGAAGAAAAAGACTGGCTGAGCCTGCCATCGCCGGCAGCGCCATCGCGGAGGGCGGATAGCCGCCC TGGCGCACATCCCACGAAGCGGTTGTGCGCCCTGCCCCGGAAGTCCTCCTCCGTTTCAATTCAATAATTTTGCACTGTAATAGCAACATTATTCGTTGGA GACGAATAAAGCTCCCCTCCTAGAATGGCCACCAGTGCCATGAGCCGTCTGTTCCGAGCCTTCCAGACGAAGATCCGACCTCCGCACTCCATCGACCCGG CAACGGGATACCCAGAAAAATACCGATAACCCAACGAGGACCCGAGGGTCGCGCCTGCTCGCCAGCCGGCCGGACCCCGGGGCCCGGCGTGCCAGCGACC
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DNA Sequence for Gene |
>NQ26_RS17495
ATGAACGATACGGATAGCAGAAAAGATCCGGACGGCTACAACTACGACGTCGTCCGCCAGTTCACCTTGATGACCCTGGTCTGGGGCATCCTCGGCATGG GCCTGGGGGTGTTCATCGCCGCCCAACTGGTCTGGCCGGCGCTCAACCTCGACCTGCCCTGGACCAGCTTCGGCCGCATCCGCCCGATCCACACCAGCCT GGTGATCTTCGCCTTCGGCGGCAGCGCGTTGTTCGCCACCTCCTTCTACGTGGTGCAGCGCACCAGCGGCGTGCGGCTGATCTCCGATGCCCTGGCGCGC TTCGTGTTCTGGGGCTGGCAGGCGGCGATCGTGGGGATGATCGTCAGCTACCCGCTGGGCTATACCACCTCCAAGGAATACGCCGAGATGGAATGGCCGC TGGCGCTGTGGATGGCGATCGTCTGGGTGGTCTATGCCTACCTGTTCTTCGGCACCATCGCCCGTCGCAAGGTGAAGCACATCTACGTCGGCAACTGGTT CTACGGCGCCTTCATCATCGTCACCGCGATGGTCCATATGGTGAACCACGCATTGCTGCCGGTGAGCCTGGGCAAGTCCTACTCGGCCTATTCCGGCGCC ACCGACGCGATGATCCAGTGGTGGTACGGGCACAGCGTGGTCGGCTTCATCCTCTCGGTCGGCTTCCTCGGCATGATGTACTACTTCGTGCCCAAGCAGG CCGGGCGACCGATCTACTCCTATCGCCTGTCCATCGTGCATTTCTGGGCGATCATCTCGATCTACATCTGGGCCGGCCCGCACCACCTGCACTACACCGC GCTACCGGACTGGGCGCAGTCGCTCGGCATGGTGATGTCGCTGATCCTCCTGGCACCGAGCTGGGGCGGCATGATCAACGGCATGATGACCCTCTCCGGG GCCTGGCATAAGTTGCGCGACGACCCGATCCTGCGCTTCCTGGTGGTGTCCCTGGCGTTCTACGGCATGTCCACCTTCGAAGGCCCGATGATGGCGATCA AGACGGTCAACTCGCTGTCCCACTACACCGACTGGACCATCGGCCATGTCCACGCCGGCGCCCTCGGCTGGGTGGCGATGATCTCCATCGGCACGCTCTA CCACATGATCCCGAAACTCTGGGGCCGCGAGCGGATGCACAGCGTCGGCCTGATCAACGCGCACTTCTGGCTGGCCACCATCGGCACCGTGCTGTACATC GCCTCGATGTGGGTCAACGGCATCACCCAGGGCCTGATGTGGCGGGCGGTCAACGAGGACGGCACGCTCACCTACTCGTTCGTCGAGGCGCTGGTGGCCA GCCATCCGGGCTACGTGGTGCGCCTGCTCGGCGGCGCCACCTTCGCCAGCGGCATGCTGCTGATGGCCTACAACACCTGGCGGACCCTGCGCAGCGCGCA GGACCAGCGGCAGCCGGTCCTGGCGGCCGGCCAGGGGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACATGCTGTTGTCCCTGCTGTGCCTCTCCACCCTGGCGCTCGGCCTCGCCCTCAGCCTCGCCGGCAGTACCCGCGAGGAACGCGAACAGGCCGCCCTGCT GCCGTTCGCCGACGATCCCGAGGCCGCCCGCCGGGTCGCCCGGGATACCGGCAAGATCTGCCGGCAGGTGGTCCGCCCCCTCGAGGAATCCCGCGAGGCC GCCGGCCCGCCGTTCCTCGCCTGAACCGACTCCATCATCCAGGGATGGATGCCTCCAGCACGAAAGTGCCTTACGGGGCCGGCAACGGCCCCTTTCTTTC GCTTCGAAGAGTTCCATGAACGACTCCCCCAGCACCGCCGTACGCACCTGGCTGAAAGGCTTCCGCCCCCTGACCCTGAACGCCCGACCACGCGACTGCC TGCGCGCCGGACTCGGCGCCTGCATCGGCGCGCTCGCCGCGGTATTCGCCTGCCAGGCGTTGTTCGGCAGCGAGCTGGCGCTGCGCCTGGCAGCGCCGCT
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Amino Acid Sequence |
>cytochrome oxidase subunit I
MNDTDSRKDPDGYNYDVVRQFTLMTLVWGILGMGLGVFIAAQLVWPALNLDLPWTSFGRIRPIHTSLVIFAFGGSALFATSFYVVQRTSGVRLISDALAR FVFWGWQAAIVGMIVSYPLGYTTSKEYAEMEWPLALWMAIVWVVYAYLFFGTIARRKVKHIYVGNWFYGAFIIVTAMVHMVNHALLPVSLGKSYSAYSGA TDAMIQWWYGHSVVGFILSVGFLGMMYYFVPKQAGRPIYSYRLSIVHFWAIISIYIWAGPHHLHYTALPDWAQSLGMVMSLILLAPSWGGMINGMMTLSG AWHKLRDDPILRFLVVSLAFYGMSTFEGPMMAIKTVNSLSHYTDWTIGHVHAGALGWVAMISIGTLYHMIPKLWGRERMHSVGLINAHFWLATIGTVLYI ASMWVNGITQGLMWRAVNEDGTLTYSFVEALVASHPGYVVRLLGGATFASGMLLMAYNTWRTLRSAQDQRQPVLAAGQGA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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