Pseudomonas aeruginosa AZPAE12417, NQ26_RS17100

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0019867 outer membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07660
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:2.170.130.10 - IPR037066 TonB-dependent receptor, plug domain superfamily 152 278 1.8E-28
Pfam PF00593 TonB dependent receptor IPR000531 TonB-dependent receptor-like, beta-barrel 365 877 1.6E-42
Gene3D G3DSA:3.55.50.30 - - - 38 144 3.1E-24
Gene3D G3DSA:2.40.170.20 - IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily 283 884 1.5E-57
SUPERFAMILY SSF56935 Porins - - 134 884 1.24E-97
Pfam PF07660 Secretin and TonB N terminus short domain IPR011662 Secretin/TonB, short N-terminal domain 66 114 2.3E-7
PANTHER PTHR47234 - - - 343 884 0.0
CDD cd01347 ligand_gated_channel - - 153 884 8.52305E-73
SMART SM00965 STN_2 IPR011662 Secretin/TonB, short N-terminal domain 65 116 1.3E-10
FunFam G3DSA:2.40.170.20:FF:000043 Uncharacterized protein - - 284 884 0.0
Pfam PF07715 TonB-dependent Receptor Plug Domain IPR012910 TonB-dependent receptor, plug domain 147 267 4.3E-22
FunFam G3DSA:3.55.50.30:FF:000002 Probable TonB-dependent receptor - - 36 144 3.2E-30

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.