Pseudomonas aeruginosa AZPAE12417, NQ26_RS10490 (algL)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE12417 AZPAE12417_contig_11, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGGAATTCCACAAGAACCCGCCGAAGATCCTCATCTGGGAATTCGCCACCCACTACGACATGGCGCAGAAGAGCTTCTACCGCCAGGCCATGCCGCTGGT GGACAACGGCTGCTCCGGCCGGAAGACCGTGCTCAGCCGCAAGGTCAAGCTGCGCCAGGGCCGCAACGAGGTGCTGCTGAACAGCGCCGCGCTACCGATC CGTAGCGGCAGCTACGTCGCCGACGTGACCTACAGCGACCCTTCGGTACACGAGTTGAAGAACACCATCTGGTACATGAACGGCCGCCGCGAGCAGTTGA AGATCGAGCAGTCGAAAGCCGTCGATACCGGCGGCCGCTACGTCTTCCAGCTGCGCAACGACAGCGACTGGGCCGACCAGCAGTTCCTTTCCCTGGAAAT CGAAGCGCCGGAGGACATGCCCCAGGGCCTGGAGGTCCAGGCCAGCATCTGCCAGGCGGCGCCCGCCAAGGCCAGCCAGTCGGTGGCCGGGAGGTAAACG
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| DNA Sequence for Gene |
>NQ26_RS10490
|algL
ATGAAAACGTCCCACCTGATCCGTATCGCCCTGCCCGGTGCCCTCGCCGCGGCATTGCTCGCCAGCCAGGTCAGCCAGGCCGCCGACCTGGTACCCCCGC CCGGCTACTACGCGGCGGTCGGCGAGCGCAAGGGCAACGCCGGCAGCTGCCCCGCGGTGCCGCCGCCGTATACCGGCAGCCTGGTCTTCACCAGCAAGTA CGAAGGCTCCGATTCGGCGCGGGCGACCCTCAACGTCAAGGCGGAGAAGACCTTCCGCTCGCAGATCAAGGACATCACCGACATGGAGCGCGGCGCCACC AAGCTGGTCACCCAGTACATGCGCAGCGGCCGCGACGGCGACCTGGCCTGCGCACTGAACTGGATGAGCACCTGGGCCCGCGCCGGCGCCTTGCAGAGCG ACGACTTCAACCACACCGGCAAGTCCATGCGCAAATGGGCGCTGGGCAGCCTCTCCGGCGCCTACATGCGCCTGAAGTTCTCCAGCTCGCGGCCGCTCGC GGCCCACGCCGAGCAGAGCCGGGAAATCGAGGACTGGTTCGCCCGGCTCGGCACCCAGGTAGTCCGCGACTGGAGCGGCCTGCCGCTGAAGAAGATCAAC AACCATTCCTACTGGGCGGCCTGGTCGGTGATGTCCACCGCGGTGGTGACCAACCGCCGCGACCTCTTCGACTGGGCGGTGAGCGAGTTCAAGGTCGCCG CCAACCAGGTCGACGAGCAGGGCTTCCTGCCCAACGAACTCAAGCGCCGCCAGCGCGCCCTCGCCTACCACAACTATGCGCTGCCACCGCTGGCGATGAT CGCCGCGTTCGCCCAGGTCAACGGCGTCGACCTGCGCCAGGAGAACCACGGCGCCCTGCAGCGCCTGGCCGAGCGGGTGATGAAGGGAGTCGACGACGAG GAAACCTTCGAGGAGAAGACCGGCGAGGACCAGGACATGACCGACCTCAAGGTCGACAACAAGTACGCCTGGCTGGAGCCCTACTGCGCCCTCTACCGCT GCGAGCCGAAGATGCTCGAGGCGAAGAAGGACCGCGAGCCGTTCAACAGTTTCCGCCTCGGCGGCGAAGTGACGCGGGTGTTCAGCCGCGAAGGGGGAAG TTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGGCGTGGCGGGAAGCGGGCGCACAGGCCGGGGGCCACGCGCCCCTCTACCCCGCTCGCCGACCAGGCGCCACACCCCGACCCATGCGCGACAGACGCGG GCGGGCGCAACACCTTAGGCAACACCACGGGGAGGAAAACGGCGGGTCGTCCCGCCTTTCCTCGAGCGCTCCAGGGCGCGGAAAGGCAGGGCCGACCTGA ATGGTTGACGCTCTAGAGAGAGAGACGGCATGGTCTTTTCTTCAAACGTGTTCCTGTTCCTGTTCCTGCCGGTCTTTCTCGGCCTGTACTACCTGAGCGG CGAACGTTACCGGAACCTGCTGCTGCTGATCGCCAGCTACGTGTTCTACGCCTGGTGGCGGGTGGACTTCCTCCTGCTGTTCGCCGGGGTCACCGTCTTC AACTACTGGATCGGCCTGCGCATCGGCGCCGCCGGCGTACGCACCAGGGCCGCGCAACGCTGGCTGATCCTCGGCGTGGTGGTCGACCTCTGCGTGCTCG
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| Amino Acid Sequence |
>poly(beta-D-mannuronate) lyase
MKTSHLIRIALPGALAAALLASQVSQAADLVPPPGYYAAVGERKGNAGSCPAVPPPYTGSLVFTSKYEGSDSARATLNVKAEKTFRSQIKDITDMERGAT KLVTQYMRSGRDGDLACALNWMSTWARAGALQSDDFNHTGKSMRKWALGSLSGAYMRLKFSSSRPLAAHAEQSREIEDWFARLGTQVVRDWSGLPLKKIN NHSYWAAWSVMSTAVVTNRRDLFDWAVSEFKVAANQVDEQGFLPNELKRRQRALAYHNYALPPLAMIAAFAQVNGVDLRQENHGALQRLAERVMKGVDDE ETFEEKTGEDQDMTDLKVDNKYAWLEPYCALYRCEPKMLEAKKDREPFNSFRLGGEVTRVFSREGGS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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