Pseudomonas aeruginosa AZPAE12417, NQ26_RS01390

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF69349 Phage fibre proteins - - 444 626 1.8E-37
Gene3D G3DSA:2.30.110.50 - - - 20 324 3.4E-87
SUPERFAMILY SSF69279 Phage tail proteins - - 10 184 4.82E-57
SUPERFAMILY SSF69255 gp5 N-terminal domain-like - - 366 454 2.46E-34
MobiDBLite mobidb-lite consensus disorder prediction - - 622 674 -
Gene3D G3DSA:2.40.50.230 - IPR037026 Vgr protein, OB-fold domain superfamily 357 458 3.6E-43
SUPERFAMILY SSF69279 Phage tail proteins - - 184 366 2.55E-45
Gene3D G3DSA:3.55.50.10 - - - 95 188 3.4E-87
FunFam G3DSA:3.55.50.10:FF:000001 Actin cross-linking toxin VgrG1 - - 95 188 1.1E-37
Pfam PF04717 Type VI secretion system/phage-baseplate injector OB domain IPR006531 Gp5/Type VI secretion system Vgr protein, OB-fold domain 388 455 2.9E-15
NCBIfam TIGR01646 JCVI: type VI secretion system tip protein VgrG IPR006533 Type VI secretion system, RhsGE-associated Vgr protein 22 506 7.1E-125
NCBIfam TIGR03361 JCVI: type VI secretion system tip protein TssI/VgrG N-terminal domain IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset 11 524 0.0
Gene3D G3DSA:4.10.220.110 - - - 220 279 3.4E-87
PANTHER PTHR32305 - - - 69 625 6.7E-87
Pfam PF05954 Phage tail baseplate hub (GPD) - - 29 322 2.3E-79

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.