Strain | Pseudomonas aeruginosa strain AZPAE12417 AZPAE12417_contig_1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GAGACGGGTCTTGGTGTCGGCGAGCTTGATGTCGCGGGCCAGTTCGGGGGTCAGCTTGCCCTGTTCCTCGATGCTGGCGAGGATCGCGCCGCGGCGTTCT TCCAGTTCGCGCAGGTAGCGCAGGCGCTCTTCCAGCATGCGCAACTGGGTATCGTCGAGGCTGCCGGTGACCTCTTTGCGGTAACGGGCGATGAAGGGAA CGGTGGAGCCTTCGTCGAGCAGGGCGACGGCCGCGGCGACTTGCTGCGGTTGAACGCGGCCGGAGGGCAGTGCGGAGAGCTCTTCGGCGATACGGGTGTT GATGCTGTCCATTGATCCACCTGGTAAAACGAACGAAAACGGGCCGTGTAGACAACGCCCCGCCGCAAAAGCGCCGCATTATACCTGCCAAGTTTCGCGT TGGAGGGCGGCTGGTCGGGGAAAAATCTGCTAACAATGGACAGTCCGGCCCAGCCGCTACCTGGGCGATAATGCCCGCCTGACTCATTCTGGGAGTTTCT
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DNA Sequence for Gene |
>NQ26_RS01055
ATGTCGAACCCTGCCGCCCTGGCCGAAGGTGAAAAGATCCTCGTCGTCGACGACGACGCCCGCCTGCGCCGCCTGCTCGAACGTTTCCTCGACGAGCAGG GCTACCGCGTCCGCGCGGTGGAGAACACCGAGCAGATGGATCGCCTTCTATCCCGCGAACTGTTCCAGTTGGTTGTGCTCGACCTGATGCTTCCCGGCGA GGACGGCCTCACTGCCTGCCGCCGCCTGCGCGAACAGAACAATCAGGTGCCGATCATCATGCTCACCGCCAAGGGCGACGAGGGCAGCCGCATCCAGGGC CTGGAACTGGGCGCCGACGACTACCTGGCCAAGCCGTTCAACCCGCGCGAACTGCTGGCGCGGATCAAGGCCGTGCTGCGCCGCCAGGCGCCGCTGGTGC CCGGCGCGCCTGCCGGTGCCGACGAGGTGGTGACCTTCGGCGACTACCAGCTGTTCCTCGCCACCCGCGAACTGAAGAAGGGCGACGAGGTACACATGCT GACCACCGGCGAGTTCGCCGTGCTCAAGGCCCTGGTGCAGCACGCCCGCGAACCGCTGACCCGGGACAAGCTGATGAACCTCGCCCGTGGCCGCGAGTGG GATGCCCTGGAGCGTTCCATCGACGTGCAGATCTCGCGCCTGCGCCGGCTGATCGAGCCGGATCCGTCCAAGCCGCGCTATATCCAGACGGTCTGGGGCG TCGGCTACGTGTTCGTGCCGGACGGCAACGCGCGCAAGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTCTCCGCGCGGCCGGTGCAGCGATGCACCGGCCGCGTCGTCTTACCCGCAACAGGCGTCGGCCCCGTCCGCCGGCGCGCAACCGGTCCGATCGATGAAA ACGCCGCTCTGGTTCCCGCAAAGCTTCTTCGCCCGCACCCTCTGGCTGGTGCTGATCGTCGTGCTGTTCTCCAAGGCGCTGACCCTGGTCTACCTGCTGA TGAACGAGGACGTGATCGTCGACCGCCAGTACAGCCACGGCGCGGCGCTGACCATCCGCGCGTTCTGGGCTGCCGACGAGGAGTCGCGCGCGGCCATCGC CAAGGCTTCCGGCCTGCGCTGGGTGCCGAGCAGCGCCGACCAGCCCGGCGAGCAGCACTGGCCGTACACGGAAATCTTCCAGCGGCAGATGCAGATGGAG CTGGGGCCGGACACCGAGACCCGCCTGCGTATCCACCAGCCGTCGCAGCTCTGGGTGCGCGCACCGAGCCTCGGCGAAGGCTGGCTGGCGGTGCCGCTGT
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Amino Acid Sequence |
>chemotaxis protein CheY
MSNPAALAEGEKILVVDDDARLRRLLERFLDEQGYRVRAVENTEQMDRLLSRELFQLVVLDLMLPGEDGLTACRRLREQNNQVPIIMLTAKGDEGSRIQG LELGADDYLAKPFNPRELLARIKAVLRRQAPLVPGAPAGADEVVTFGDYQLFLATRELKKGDEVHMLTTGEFAVLKALVQHAREPLTRDKLMNLARGREW DALERSIDVQISRLRRLIEPDPSKPRYIQTVWGVGYVFVPDGNARKA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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