Pseudomonas aeruginosa AZPAE12417, NQ26_RS00475

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE12417 AZPAE12417_contig_1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AAGGCTACAGCCATGTGCTCAACGGGCGCTTCAAGGGCGGCCACATCACCCGCCACTACGGCCAGCCGGAGCAGCACGTCCATGCCGTCCAGCTGGAGCT GGCGCAGTGCACCTACATGGACGAGCAGGCCCCGTTCGCTTACCGCGCGGACCTCGCCGAAGCGACCCGCGCAGTCATCCGCGAACTGCTGGAAAGCCTC CTCGCCTGGGGTCGCGAGCGCTACGCCTGAGGTGCTCGGAGGCGGCGGACGCCTGGCCCGTCCTGGCGGACGTGAAGGCCGCGGATGGGGTGGGGCGTCC GCGTCGGCATTCTGGAAATTTTCTGTTACAAATTTATTGAGGTCAGCGTTGATGCGGCCGGGAGGCCGAGTGCGCAAAGAGTTGCACAACTGTTCTCCTC TATCCTCTCGGCCAGCATTTCCATCGCGCGGGCTCAGGCGCGTCGCGCCCGGAACCGAATACGCCAGGAACGCACGGCTGCGTTTCCAAGAGGACAGTGA
DNA Sequence for Gene
>NQ26_RS00475
ATGTTCGCCCCCGCCAACCAGACGCACTTCAGCCTTCGCATCGAAAACCTCCGGCACGACTTCCAGGTACTCGCCTTCCGCGGTCGCGAAGCCATCAGCC AGCCCTTTCGCTTCGACCTGGAGCTGGTCAGCGAGCGATCCGATCTGGACCTCGACGCGCTGTTGCACCAGCCGGCCTTCCTGATCCTCTCGCCGAGCGG GCAAGGGGTCCACGGACAGCTCACCAGCATCGCCCAGGGGGACTCCGGCAAGCGCCTGACCGGCTATCGCGCGACCCTGGAGCCGCGCCTGGCCTACCTG GGGCTGTGCAGCGACCAACGCATCTTCCAGCGCCTCAGCGTGCCGGAAATCATCGGCCGGGTGCTGGAGGGCCACGGCATTCTCGCCGACGCCTACCGCT TCCAGCTGGGCCCGACGCCGTACCCGGCCCGCGAATACTGCACGCAGTACGACGAAACCGACCTGGCGTTCCTCAGCAGGCTCTGCGAGGAGGAAGGCAT CCATTACCACCATGAGTTTTCTGCCCAGGGCCATGTGCTGGTCTTCGGCGACGACCAGACCTCCTTTCCGCGGCTGCAACGCCCCGTCGCCTACGTGCAG GACGCCGGGCTGGTCGCCGACCAGCCGGTGGTCAAGCGCTTCGGCGTGCGCTTCGACACCCGTGCCAGCCGGGTTACCCGGCGCGACTACGACTTCGAGC AACCCGCGTTGCAGATGCAGGCCGCCCATGGCCCGCAGCCCGGGGCGCAGCAACCGGACCTAGAGGACTACGACTATCCCGGCCGCTTCACCCACCGCGA GCGCGGCAAGCACCTGAGCCGGCGCGCGCTGGAACGGCATCGCGCCGACTACCTACAGGCCAGGGGCGAAAGCGACGAACCGGCGCTGCTCAGCGGACAC TTCCTGACGCTGTCCGCGCATCCCCGCGGCGAATGGAACGATCTCTGGCTGCTTACCGAGGTTCTCCACGAAGGGCGGCAGCCGCAGGTACTGGAAGAGT CGATCGACAGCGACGTCGCGCAGGGCCGGGGCGATTTCCGCCAGGGCTATCGCAACCGTTTCGTCGCCACTCCCTGGAGCGCGCATTTCCGCCCCCCGCT GGAGCATCCCAAGCCACGCGTGCTGGGCTGTCAGACAGCGGTCGTGACCGGCCCCGCCGGCGAGACCATCCACTGCGACCAATACGGCCGGGTCAAGGTG CAGTTCTTCTGGGATCGCCTCGGCCAGGCCGACGACAACACCAGTTGCTGGTTGCGCGTCGCCTCCAACTGGGCGGGCAAACGCTATGGCGGCGTAGCCA TCCCGCGGGTGGGCATGGAAGTCCTGGTGGGTTTCCTGGAGGGCGATCCGGATCAGCCGCTGGTCACCGGTTGCCTCTACCACAGCGAAAACCGGGTGCC CTACGAGCTGCCGCAGAACAAGACCCGCAGCGTTTTCAAGACCGACAGCTACCCCGGCGGCGGCGGTTTCAACGAACTGCGCATCGAGGACCGCAAGGGC CAGGAACAGATCTTCGTCCACGCCCAGCGCGACTGGGACGAGAACATCGAGCACGACCAGAAGATCCGCGTCGGCCATGAGCGCCACGACACGGTCGAGG GCGATAGCTACAGCGAGTTCAGGGCCGAGGAACAGCGCACGGTCCACGCCGACCGCAAGGTCGAACTGAAGGCGGCCGACCACCTCAGCGTCGCCGACGC GTTGCACCTGAGGATCGGCACCGGCCAGTTCGTCGAGGCGGGCGACGAGATCCATTTCAAGGCCGGCGACAAGGTAGTGATCGAGGCAGGCATGGAGCTG ACCCTAAAGGGCGGTGGCAGCTTCGCCAGGCTCGACCCGGGCGGTGTCACCCTCGACGGCGCCCAGGTGATGATCAACAGCGGCGGCAGCCCCGGCATCG GTAGCGGCGTTCGCGCGCTGTCGCCGCTGCAACCGCTCGCGGCCGACGCCGCGGCGGCGGGAGGCGCCTTGTTGGGAGCCATCGCCCAGAAGGTCGGCGA AGCGCCGCAGAAACTCCTGCGTTTCGAACTCAGTCCGTTGCCCGGCGTGCCATCGGCGGCCAGGCAACCGTATCGGCTCTACGCCAACGGTGCCTTCAAG GAGGAGGGCATCGCCGACGAAGGCGGCGCAATCAGCTTCGAACCGCTGCCGGGCGAACGCACCTATCGCATCGAGACCGCCAATGGCCACGCCTACGAAG TGGAGATGGTCGACCAGCCGGACGCACTGCAGGCCGACGATCGGCTCGCCCAGCAGGGGTTCCGCGACTACCGGGCGGAAATGCCCCAGCACAAGCCGCG TTCCGCCCCGGACGCCTACCGGCGCGACGCCTCGCGGCCCGGCGCCGCCGACAAGGATGACCCCACGCCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGACCTGTACAAACCGCAGACCCTCAAGCTGTACGCGCAACAGGCCGGCAGCGTCCGGCTGACCCTCGACTGGTTCGCCAACAAGGCTTTCTACCCGCC GCGCGCGGGTGTGCACATCAAGCCGCTGATCAATGGCCAGGCGGCCTTCGACGCGGTGCATGCGGCGATGGAAGCGGCCCGGCACAGCATCGACATCATC ACCTGGGGCTTCGACCCGGCCATGCGCTTCAAACGCCCCGACGGACCGCGAATCGGCGAATTGCTGCAGACGAAGGGCCGCGAAGGGGTGCAGGCGCGGG TGCTGGTCTGGAGCAACCAGCTCGCCAGGCTCAAGGAAAACACCATCCCCGGGGCCGGCGTCGGCGGTTCCGGCGGCACCTGGGCGGGCTCGGGCGTCGC CAGCGGCAGCGCAGTGGACAACGAGGTGCTGCGGCTGGAGCAGCGGCGCCAGCATAACCTCAACCTCATCGCGCGGCAGCAGGAAGCCCTGGAGCGCTCG
Amino Acid Sequence
>type IV secretion protein Rhs
MFAPANQTHFSLRIENLRHDFQVLAFRGREAISQPFRFDLELVSERSDLDLDALLHQPAFLILSPSGQGVHGQLTSIAQGDSGKRLTGYRATLEPRLAYL GLCSDQRIFQRLSVPEIIGRVLEGHGILADAYRFQLGPTPYPAREYCTQYDETDLAFLSRLCEEEGIHYHHEFSAQGHVLVFGDDQTSFPRLQRPVAYVQ DAGLVADQPVVKRFGVRFDTRASRVTRRDYDFEQPALQMQAAHGPQPGAQQPDLEDYDYPGRFTHRERGKHLSRRALERHRADYLQARGESDEPALLSGH FLTLSAHPRGEWNDLWLLTEVLHEGRQPQVLEESIDSDVAQGRGDFRQGYRNRFVATPWSAHFRPPLEHPKPRVLGCQTAVVTGPAGETIHCDQYGRVKV QFFWDRLGQADDNTSCWLRVASNWAGKRYGGVAIPRVGMEVLVGFLEGDPDQPLVTGCLYHSENRVPYELPQNKTRSVFKTDSYPGGGGFNELRIEDRKG QEQIFVHAQRDWDENIEHDQKIRVGHERHDTVEGDSYSEFRAEEQRTVHADRKVELKAADHLSVADALHLRIGTGQFVEAGDEIHFKAGDKVVIEAGMEL TLKGGGSFARLDPGGVTLDGAQVMINSGGSPGIGSGVRALSPLQPLAADAAAAGGALLGAIAQKVGEAPQKLLRFELSPLPGVPSAARQPYRLYANGAFK EEGIADEGGAISFEPLPGERTYRIETANGHAYEVEMVDQPDALQADDRLAQQGFRDYRAEMPQHKPRSAPDAYRRDASRPGAADKDDPTP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site