Pseudomonas aeruginosa M18, PAM18_2505

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00175
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006814 sodium ion transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00175
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005283 amino acid:sodium symporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00175
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006865 amino acid transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00175
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Membrane proteins Other M18 genes in this class
Transport of small molecules Other M18 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00175 Sodium/alanine symporter signature IPR001463 Sodium:alanine symporter 214 233 1.8E-53
PRINTS PR00175 Sodium/alanine symporter signature IPR001463 Sodium:alanine symporter 353 375 1.8E-53
PRINTS PR00175 Sodium/alanine symporter signature IPR001463 Sodium:alanine symporter 93 115 1.8E-53
NCBIfam TIGR00835 JCVI: amino acid carrier protein IPR001463 Sodium:alanine symporter 16 443 0.0
FunFam G3DSA:1.20.1740.10:FF:000004 Sodium:alanine symporter family protein - - 61 449 0.0
PRINTS PR00175 Sodium/alanine symporter signature IPR001463 Sodium:alanine symporter 309 327 1.8E-53
PANTHER PTHR30330 AGSS FAMILY TRANSPORTER, SODIUM-ALANINE IPR001463 Sodium:alanine symporter 4 448 0.0
PRINTS PR00175 Sodium/alanine symporter signature IPR001463 Sodium:alanine symporter 412 432 1.8E-53
Pfam PF01235 Sodium:alanine symporter family IPR001463 Sodium:alanine symporter 56 448 0.0
Gene3D G3DSA:1.20.1740.10 Amino acid/polyamine transporter I - - 62 449 1.0E-15
PRINTS PR00175 Sodium/alanine symporter signature IPR001463 Sodium:alanine symporter 186 204 1.8E-53

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.