Pseudomonas aeruginosa M18, PAM18_1913

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004185 serine-type carboxypeptidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30023
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006508 proteolysis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30023
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Cell wall / LPS / capsule Other M18 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG paf00550 Peptidoglycan biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C 398 412 2.9E-22
PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C 323 345 2.9E-22
SUPERFAMILY SSF56601 beta-lactamase/transpeptidase-like IPR012338 Beta-lactamase/transpeptidase-like 55 497 1.16E-91
PANTHER PTHR30023 D-ALANYL-D-ALANINE CARBOXYPEPTIDASE IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C 33 502 0.0
Gene3D G3DSA:3.40.710.10 - IPR012338 Beta-lactamase/transpeptidase-like 308 495 1.1E-54
FunFam G3DSA:3.50.80.20:FF:000002 D-alanyl-D-alanine carboxypeptidase dacB - - 124 191 2.8E-47
Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C 58 482 1.8E-86
PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C 383 397 2.9E-22
PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C 460 473 2.9E-22
Gene3D G3DSA:3.50.80.20 - - - 120 191 8.0E-22
PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C 96 115 2.9E-22
NCBIfam TIGR00666 JCVI: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C 90 482 6.5E-65

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.