Pseudomonas aeruginosa M18, PAM18_1429

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009103 lipopolysaccharide biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01869
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30561
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:1901505 carbohydrate derivative transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01869
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30561
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Cell wall / LPS / capsule Other M18 genes in this class
Adaptation, Protection Other M18 genes in this class
Membrane proteins Other M18 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG paf01503 Cationic antimicrobial peptide (CAMP) resistance 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Hamap MF_01869 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE [arnE]. IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE 1 115 29.10165
PANTHER PTHR30561 SMR FAMILY PROTON-DEPENDENT DRUG EFFLUX TRANSPORTER SUGE IPR000390 Small drug/metabolite transporter protein family 1 114 1.1E-17
SUPERFAMILY SSF103481 Multidrug resistance efflux transporter EmrE - - 34 113 2.09E-13
Gene3D G3DSA:1.10.3730.20 - - - 4 114 6.1E-19
Pfam PF00892 EamA-like transporter family IPR000620 EamA domain 39 111 6.0E-9
FunFam G3DSA:1.10.3730.20:FF:000002 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE - - 1 114 1.7E-37

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.