Pseudomonas aeruginosa M18, PAM18_1241 (wspD)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa M18 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCTGTCTTTCGTGTTCCGCCGGACCAGCGAGGCGCCCCGCGGCGCGCGGCCCAAAGCGGTGAGCGACGGAGCGCGCCCGGTCGTTGCCGCCGCCGTGGAG CGTGCGAGTATTCGGCCTTCGCCGCCGCCACCGGCGAAACCGCGCCAGCGGCTATCCAGCCTGGTTCCGCCAGCCAGCGGCCAGCCCCTCGCCAGTCCCG TCGGCGAGTTCGACGAAATCGCCCGCCTGGCGGATGCCGGCCAGCATCGCGAGGCGCGCGCCGCCTGCGAGCGCCAACTGGCCGCGCGTGGGCCGTCGGC CACGGTCTTCTACTGGCTCGGGCTGCTCAGCGATGTCGCCGGGCAGGAGCAGGAAGCCCAGGATTTCTACCGCAAGGCCCTGTACCTGGAGCCGCAGCAC GCCGAGGCGCTGGCGCACCTGGCGGCGCTGCTCGCCGCTCGCGGCGACCATGCCGGCGCCCGGCGCCTGCAGCAACGTGCGGCCCGTGGAGTGAACAAAG
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| DNA Sequence for Gene |
>PAM18_1241
|wspD
ATGGTTGAGGCGAGCCTGACCTTGCTCGATACCCAACAGGTGGATGACTGCTGGAACCGCATCGGCGTGCATGGCGACAAGTCCTGCGAACGCCTGGCCG AGCATGTCCATTGCCGCAACTGCGAGGTTTACGCTGCCGCGGCGACCTACTTGCTGGACCGCATCGCCCTGCGCCAGGACCAGCTCGACAGCGCCGAAAC GATGGACAGCCAGCGCGAACAGAGCGACCTCGGCGAGACGCGTTCGATCCTGGTGTTCCGCCTGGGCGAAGAGTGGTTCGGCCTGGCCACCGGCAGCCTG GTGGAAGTGGCGCCGATGAATCCTATCCATTCCCTGCCGCACCAGCGCTCGCGCGCCCTGCAAGGGGTGACCAACGTGCGCGGCGCGCTGGTCGCCTGCC TTTCCCTCGGCGAACTGCTGGATCTCGAACCCGGCGCCGCGCCGGTCAGCGAGCGCCGGGTGGTTCCGCGCATGCTGATCATTTCCGCCGCCGGCGGTCC GGTGGTGGCGCCGGTGGAGGAAGTCGACGGCATCCATGCGATTCCGCTGGCGCGGATACTGCCGCCCAACCACGCCGACGGCCAGGCCTCGCGCCGGCAC GTGGCCGGCGTGCTGCAATGGCGCGAGCGGAGCATCACCCTGCTCGACGAAGGCCCTCTCCTGCAAGCCGTAGCGCGGAGCCTGGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCCGGACCAGATGAGAGACGCGTCGCTGCTCGAGCTGTTCCGGCTCGAGGCGGAGGCCCAGACCCAGGTGCTCAACGCCGGCCTGATGGCGCTGGAGCG CAGCCCGACCCAGGCCGACCAACTGGAAGCCTGCATGCGCGCCGCGCACTCGCTGAAAGGCGCGGCGCGTATCGTCGGGCTGGACGCCGGCGTGCGCGTG GCGCACGTCATGGAGGATTGCCTGGTGGAGGCGCAGGACGGACGCCTGCTCCTGCAATCGGAACATATCGATGCGTTGCTCCAGGGCTGCGACCTGTTGC TGCGTATCGGCACCCCGCCAGCCGGCGACGCAGGCTGGGCCGAAGGCGCCGGGCGGGAAGAGATCGACGGCCTGGTGCTGCGCCTCGAAGGCCTGGTGCG CAGCGGCCTGCCGCTGGCCCGCGCGGAGCTGCCGGCGACGACTCCCGGTCTGCCGGAAGCGGTCCCCGAGGCGCCGCCAGCGGCGTCAGCGGCCGCCAGC
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| Amino Acid Sequence |
>chemotaxis protein CheW
MVEASLTLLDTQQVDDCWNRIGVHGDKSCERLAEHVHCRNCEVYAAAATYLLDRIALRQDQLDSAETMDSQREQSDLGETRSILVFRLGEEWFGLATGSL VEVAPMNPIHSLPHQRSRALQGVTNVRGALVACLSLGELLDLEPGAAPVSERRVVPRMLIISAAGGPVVAPVEEVDGIHAIPLARILPPNHADGQASRRH VAGVLQWRERSITLLDEGPLLQAVARSLA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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