Pseudomonas aeruginosa M18, PAM18_1123

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR02010	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003690	double-stranded DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR02010	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003700	DNA-binding transcription factor activity	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR02010	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Adaptation, Protection Other M18 genes in this class

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:1.10.10.10	-	IPR036388	Winged helix-like DNA-binding domain superfamily	1	144	1.2E-48
NCBIfam	TIGR00738	JCVI: Rrf2 family transcriptional regulator	IPR000944	Transcription regulator Rrf2	1	130	1.6E-46
SUPERFAMILY	SSF46785	Winged helix DNA-binding domain	IPR036390	Winged helix DNA-binding domain superfamily	2	132	1.82E-36
Pfam	PF02082	Iron-dependent Transcriptional regulator	IPR000944	Transcription regulator Rrf2	3	131	6.8E-39
NCBIfam	TIGR02010	JCVI: Fe-S cluster assembly transcriptional regulator IscR	IPR010242	Transcription factor HTH, IscR	1	134	2.0E-66
PANTHER	PTHR33221	WINGED HELIX-TURN-HELIX TRANSCRIPTIONAL REGULATOR, RRF2 FAMILY	IPR000944	Transcription regulator Rrf2	1	143	2.1E-46
FunFam	G3DSA:1.10.10.10:FF:000026	HTH-type transcriptional regulator IscR	-	-	1	144	8.2E-73

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.