Pseudomonas aeruginosa M18, PAM18_0601

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07730
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0046983 protein dimerization activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07730
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07730
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08447
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07730
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.190.10 - - - 101 196 7.6E-46
CDD cd01007 PBP2_BvgS_HisK_like - - 14 234 1.06866E-55
SMART SM00062 AABind_6 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF 16 237 1.4E-25
CDD cd16917 HATPase_UhpB-NarQ-NarX-like - - 680 766 2.23412E-34
Coils Coil Coil - - 543 570 -
Gene3D G3DSA:3.30.450.20 PAS domain - - 426 541 3.2E-19
SMART SM00086 pac_2 IPR001610 PAC motif 502 543 13.0
Pfam PF08448 PAS fold IPR013656 PAS fold-4 305 413 5.4E-11
SMART SM00091 pas_2 IPR000014 PAS domain 298 364 8.2E-4
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 408 541 5.09E-21
Gene3D G3DSA:3.40.190.10 - - - 8 233 7.6E-46
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 677 767 2.6E-11
CDD cd00130 PAS IPR000014 PAS domain 449 540 5.06423E-5
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 304 418 3.6E-15
Pfam PF07730 Histidine kinase IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain 571 637 4.4E-14
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 310 420 3.74E-23
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 711 725 3.0E-6
SUPERFAMILY SSF53850 Periplasmic binding protein-like II - - 12 237 2.09E-36
Gene3D G3DSA:1.20.5.1930 - - - 542 630 1.2E-12
Gene3D G3DSA:3.30.450.20 PAS domain - - 298 425 1.3E-22
Pfam PF08447 PAS fold IPR013655 PAS fold-3 451 535 2.7E-15
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 753 766 3.0E-6
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 449 550 4.7E-10
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 729 747 3.0E-6
CDD cd00130 PAS IPR000014 PAS domain 317 408 2.29694E-8
Coils Coil Coil - - 411 431 -
SMART SM00086 pac_2 IPR001610 PAC motif 371 411 2.5E-4
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 646 767 4.94E-23
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 640 767 8.3E-32
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 675 769 4.1E-14
SMART SM00091 pas_2 IPR000014 PAS domain 423 496 0.12
Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF 17 235 4.4E-26
PANTHER PTHR24421 NITRATE/NITRITE SENSOR PROTEIN NARX-RELATED - - 112 770 5.3E-78

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.