Pseudomonas aeruginosa M18, PAM18_0141 (ahpF)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa M18 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TCGTGACCACCGACACCCACTTCTCGCATAAGGTCTGGCACGAAACCTCCCCGGCAGTCGGCAAGGCCCAGTTCCCGCTGATCGGCGACCCGACCCACCA GCTGACCAACGCCTTCGGCGTGCACATCCCGGAAGAAGGCCTGGCCCTGCGCGGTACCTTCGTGATCAACCCGGAAGGCGTGATCAAGACCGTCGAGATC CACTCCAACGAGATCGCCCGTGACGTCGGCGAGACCGTGCGCAAGCTGAAGGCCGCCCAGTACACCGCCGCCCACCCGGGCGAAGTCTGCCCGGCCAAGT GGAAGGAAGGCGAGAAGACCCTCGCTCCGTCCCTGGACCTGGTCGGCAAGATCTAAGACCGCGCCGGCGGCATTCGCCGCCAGCCTCTCCGGCGGACGAT CCCTCGCGGATCGTCCGCCCTTCACCCAGCCAACGCGCCGTGCAGGGCGGATGTCCCATCCGCCGGGGATACGTTTGCCCGAATTTCGAGGAGCTGAACC
|
|
| DNA Sequence for Gene |
>PAM18_0141
|ahpF
ATGTTGGACGCCAATCTTAAAACCCAGTTGAAGGCCTACCTGGAAAAGGTCAGCCAGCCGTTCGAGATCGTCGCGTCCCTCGATGACAGCGACAAATCCC GCGAGCTGCTGGGCCTGCTGCAAGACATCGTCGGCCTGACCGACAAGATCACCCTGAAGACCGACGGCAGCGATGCGCGCAAACCGTCGTTCTCGCTGAA CCGCCCCGGTGCGGACATCGGCCTGCGCTTCGCCGGTATCCCCATGGGCCACGAATTCACCTCGCTGGTGCTGGCCCTGCTGCAGGTAGGCGGCCACCCC TCCAAGCTCGACGCGGACGTGATCGAGCAGGTCAAGGGCATCGAGGGCACCTTCGAGTTCGAAACCTACTTCTCGCTGTCCTGCCAGAACTGCCCGGACG TGGTCCAGGCGCTGAACCTGATGGCCGTGCTCAACCCGAACATCCGTCACGTCGCCATCGACGGCGCGCTGTTCCAGGATGAGGTCGAGGCGCGCCAGAT CATGTCGGTGCCGAGCATCTACCTCAACGGCGAAGTCTTCGGCCAGGGCCGCATGGGCGTGGAAGAGATCCTCGCCAAGATCGACACCGGCGCCGCCGCC CGCGACGCCGAGAAGCTGACCGCCCGCGACGCCTTCGACGTGCTGGTGGTCGGCGGTGGCCCGGCCGGCGCCGCGGCGGCGATCTACGCCGCGCGCAAGG GCATTCGCACCGGCGTCGCCGCCGAGCGCTTCGGCGGCCAGGTGCTGGACACCATGGCCATCGAGAACTTCATCTCGGTGCAGGAGACCGAAGGGCCGAA GCTGGCGCGGGCGCTTGAAGAGCACGTGCGTCACTACGAGGTCGACATCATGAACCTGCAGCGCGCCAGCAAGCTGGTTCCGGCGAAAAACACTGGCGAG TTGCACGAGGTGCAGTTCGAGAGCGGCGGCAGCCTCAAGGCCAAGACCCTGATCCTCGCCACCGGCGCTCGCTGGCGCGAAATGGGCGTGCCCGGCGAGC AGGAGTACAAGGCCAAGGGTGTGTGCTTCTGCCCGCACTGCGACGGCCCGCTGTTCAAGGGCAAGCGCGTGGCGGTGATCGGCGGCGGCAACTCTGGCGT CGAGGCGGCCATCGACCTGGCCGGTATCGTCGCCCACGTGACCCTGCTGGAATTCGACAGCAAGTTGCGCGCCGACGCCGTGCTGCAACGCAAGCTCTAC AGCCTGCCGAACGTCGAGGTGATCACCAGTGCCCTGACCAGCGAAGTGAAGGGCGACGGCCAGAAGGTCACCGGCCTGGTGTACAAGGACCGCAACTCCG AGGAGTTCAAGTCGATCGAGCTGGAAGGTATCTTCGTGCAGATCGGCCTGCTGCCCAACACCGAGTGGCTCAAGGGCAGCGTCGAGCTGTCGCCGCGCGG CGAGATCATCGTCGACGCCCGTGGCGAGACCTCGCTGCCCGGCATCTTCGCCGCCGGCGACGTGACCACGGTGCCGTACAAGCAGATCGTGATCGCCGTG GGCGAGGGCGCCAAGGCTTCGCTGAGCGCCTTCGACCACCTGATCCGGACCTCCGCGCCGGAGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCCGGCCAGCGACCGTCGAACCAGGGACGCCCGGAGCGCGAAAGCGCCCCGGGCGTTTTCGTTGGCGCGACCGCCCGCCTCAGGCCGGGATATCCAGGTT CGCGTGGCCCGGCGCGGCGGCCGCCTCGGCGTAGACCTTCTCGTCCTCCTCGATCACCCGCGAGGCCGGCCCCACCAGCAACGGGTCCGGCTCATGGGCG ATGCGCCGGTCCTTGTCCGGGTAGTCCAGCGAGTGCAGGAAGTGGCGGATGCAGTTGAGTCGTGCGCGCTTCTTGTCGTCGGACTTGATGACCGTCCACG GCGCGTCGGCGGTGTCGGTATGGAAGAACATCGCCTGCTTGGCGGCGGTGTAGTCGTCCCACTTGTCCAGAGACTTGATGTCGATGGGCGACAGCTTCCA GTGCTTGAGCGGATCGTCGCGGCGCGAGATGAAGCGCCGCAGTTGTTCCTCGCGGCTCACCGAGAACCAGTACTTGAACAGCAGGATGCCGCTGTTGGTG
|
|
| Amino Acid Sequence |
>alkyl hydroperoxide reductase subunit F
MLDANLKTQLKAYLEKVSQPFEIVASLDDSDKSRELLGLLQDIVGLTDKITLKTDGSDARKPSFSLNRPGADIGLRFAGIPMGHEFTSLVLALLQVGGHP SKLDADVIEQVKGIEGTFEFETYFSLSCQNCPDVVQALNLMAVLNPNIRHVAIDGALFQDEVEARQIMSVPSIYLNGEVFGQGRMGVEEILAKIDTGAAA RDAEKLTARDAFDVLVVGGGPAGAAAAIYAARKGIRTGVAAERFGGQVLDTMAIENFISVQETEGPKLARALEEHVRHYEVDIMNLQRASKLVPAKNTGE LHEVQFESGGSLKAKTLILATGARWREMGVPGEQEYKAKGVCFCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVAHVTLLEFDSKLRADAVLQRKLY SLPNVEVITSALTSEVKGDGQKVTGLVYKDRNSEEFKSIELEGIFVQIGLLPNTEWLKGSVELSPRGEIIVDARGETSLPGIFAAGDVTTVPYKQIVIAV GEGAKASLSAFDHLIRTSAPE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|