Pseudomonas fluorescens EGD-AQ6, O204_RS130035
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens EGD-AQ6 contig9, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATTTCAAGATCTATCGCCTGGCCTTCTCGCTGGTCTCGGAGACATTCATCAGCGACTACCTGGCCGACCTCAGCAACGCGCCGGACATCCAGCCGGTGTT CCGCCATGTGGTAGCCCTGCACAAAAAAGACGAACTGGTGCACAAGCACATCTTTCCGCTGTTCGTGCAGCAGGTCGTCGGTGGCTTCACCGCGCAGCAA ACCGCCTTGTTCACCCGCGGCATCGCCAACTCCATCCGGATCTTCCCGATGCGCGAGATTTCAGCGTGGCGAATCATCCTGCCGCAACTGCTCGAAGTAT TCGGCGATCCCTCGCTGCTGCTACCGACTCAATTTACCGAGACCGGCGAAGCGGACTACTCGGCCATGCCCGAGATCCTCAGCTCCATCGGCATACACCC CGAAGTGGTGCTGCCCGAGTTGCAGGTGATGAACGAACCGGTCACCACCGTTTGAAACCAGCGTGCTGCTGATCACTACAAATTCAATAGAGTAATTGTC
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| DNA Sequence for Gene |
>O204_RS130035
ATGTGTGGATACATTGGCGTCTTTGCCAAACAACCTCGTGCGTTCAACCCGAACATGTTCGATGCCGCCCTGCGTGCCATCCATCATCGCGGCCCGGACA GCTCCAGCCAATGGTTCGACCCCAAGGGCCAAGCGGCCTTTGGTTACGTACGCCTGGGCCTGGTCGGCCTGGGTAACGGCACCCAGCCTATCGTTGCCGA CGAAGGCGACCTGGTGATGATGGTCAACGGCGAGTTCTATGACTATCAACGCATCCGCACCGAGCTGGAAGGCTACGGTTGCCGCTTCAAGACCTCGTCC GACAGCGAGATCGCCATGCACTTGTACCGCCGCCATGGCGTGCGTGGCCTCAAACAACTGCGCGGCGAGTTCACCATCCTGATATTCGATCGCTTGCGCA AAAAGCTGTTTGCCGTGCGCGACCGGGTGGGCGTCAAGCCGCTGTACTACACCGAACATGAAGGTGCCTGGTACTTCGCGTCCGAGATCAAAGCCTTGCT TGCAGCCGGCGTGCCGGCACAGTGGGACCACGAAGCCTACGCCAATCGCGGCTTTATCCTGCGCGACCGTACCGTGTTCAACAACATCCGCAGCGTGAAA CCGGGTTGCTGGATTATCGCCGACGAAAGCGGCCTGCAGACCGAACAGTACTGGGACTGGGACTTCCCGGATGCCGAGGCGACCGAACAGCGCAGCGAAG CCGAGATGATCGAGTCCCTGCGTAACACCATCGAGGAGTCCGTACGCCTGCGCCTGCACGCCGATGTGCCGGTGGGCGTGTGCCTTAGCGGCGGCCTCGA TTCGTCGGCCATGCTGGGCATCGCCACCGAGTTGACCGGCCAATCTTTGCAGGCGTTCCACTTGTCTTTCGAGGGCGAGCAAGCCTACGACGAACGCCAG TACGCCGAAGTGGCCGCCCGGCATAACCGTGCCCACCTCAACGTGCTGTCGGTGAACTCTTCCGACATGGCGGACAACTTCGAAAATGCCCTTTGGCACG CCGAAATACCCTTCGCCAACGCTCACAGCGTGGCCAAGTACCTGCTGTGCAAATACGTGCAGAACCAGGGCATGCGCGCCGTACTGACCGGTGAAGGCGC CGACGAAGTCTTCGGCGGCTACCCGCATTATCGTCGCGACATGGTGCTGTACAACCATGAAAACCAGGACCCGTCGGCGATTGCCGAACTCAGCCGACGC CTGCACGCCAGTGAAGACCGCTACCTGCCTGGCGGCAAGAATGACGTGAAATGGGTACAGGACGAACTGGGCCACGGCGTGTCCTGGCTGCAAACTCAAT CGGCGTTGTTCGGCCCCCTGGCGCAGCTGTACAGCGACGATTTCCATGAGCGTTTCAGCCATACCGATGCCTATCGCGAGTTCTACGACCGTCTGAGCCC ACGGGCACTCAACGGCTGGGAGCCGGTGAACCGCTCGTTGTACATGGTCGCCAAGTCCAGCCTGCCCAACGTGGTGCTCACCTCCCTGGGTGACCGCATG GAAATGGCCGGCAGCCTGGAAGGCCGCCCACCGCTGCTCGATCACCAAGTGATCGAGGCCGCGTGCCGCCTGCCGGTGAACATGAAAGTACGCGGCGCCA CCGAAAAGTACGCCCTGCGCGAAGCCATGCGCCCTTACGTGCCCCAGGCTGTGCTGGATCGCAAGAAGCAGTACTTCCGCGCGCCACCGGCGTCCGAAAG CCCGCAATCGAAGCTGTATGAAATGATCAACGATGTGTTGAGCGGCCCGGCATTGAATAACGTGCCGTTCTTCGATCCGCGTAAAGTGCGCGCGTTGCTG GCAACCCTGCCAAGCTTGTCCACCGCCCAACGCGCCTCGGCAGACAACCTGCTGATGGAAATCGCCGGGCTGTGCCTGATGCAAAAACGCTTCGCCTTGA ACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CTTCCCGGCGGCACATCGCGATCGCGCTGTGCCGCCTGACCCAAGGAGGGTCCATGCTGAAAAAACATTTGTTTCTGGCCGTGCTCGTTACCCTGGTGTG GGGGGTCAACTTCCCGATCACCAAACTGGGCCTGCGCGCCATCGATCCGTTTGTACTCACGGGCATCCGCTTTGCCCTCGCCGCCCTGCCCCTGGTGTTC TTTATCAAACGCCCCGCCGTCAAGTTCAGCTACGTGGCCGCCTACGGCTTTATCTTCGGGCTGGGCATGTGGGGCGTGATCAACTACGGCATCCAGGTGG GCGTGAGTCCCGGTATTGCGTCGTTGATCATTCAGCTCAGCGTGTTCTTCACCATGGGTTGGGGCTTTGTGCTGTTCAAGGAGAAAATCCGTGGTGCGCA GATGATCGGCGCCGTGCTGGCCTTGATTGGCCTGGCCGGGATCATCTCCACTCAGGAGGGCAACCATGCGGTGCTGGGCGTCCTGCTGATCGTACTCAGT
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| Amino Acid Sequence |
>asparagine synthase
MCGYIGVFAKQPRAFNPNMFDAALRAIHHRGPDSSSQWFDPKGQAAFGYVRLGLVGLGNGTQPIVADEGDLVMMVNGEFYDYQRIRTELEGYGCRFKTSS DSEIAMHLYRRHGVRGLKQLRGEFTILIFDRLRKKLFAVRDRVGVKPLYYTEHEGAWYFASEIKALLAAGVPAQWDHEAYANRGFILRDRTVFNNIRSVK PGCWIIADESGLQTEQYWDWDFPDAEATEQRSEAEMIESLRNTIEESVRLRLHADVPVGVCLSGGLDSSAMLGIATELTGQSLQAFHLSFEGEQAYDERQ YAEVAARHNRAHLNVLSVNSSDMADNFENALWHAEIPFANAHSVAKYLLCKYVQNQGMRAVLTGEGADEVFGGYPHYRRDMVLYNHENQDPSAIAELSRR LHASEDRYLPGGKNDVKWVQDELGHGVSWLQTQSALFGPLAQLYSDDFHERFSHTDAYREFYDRLSPRALNGWEPVNRSLYMVAKSSLPNVVLTSLGDRM EMAGSLEGRPPLLDHQVIEAACRLPVNMKVRGATEKYALREAMRPYVPQAVLDRKKQYFRAPPASESPQSKLYEMINDVLSGPALNNVPFFDPRKVRALL ATLPSLSTAQRASADNLLMEIAGLCLMQKRFALN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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