Pseudomonas fluorescens EGD-AQ6, O204_RS132505
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens EGD-AQ6 contig7, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AAACGACAATGGGATGCCCAGCTCAAGCAGATGGCTGTGCACACCGCGTACCCCAAGGGTGCGCTGGTTGTCGGCGGCGGTGAGCAGGGCGTCGATGACC TTCAGCCGGATCAGGCTGGTGCGCAAGCCAAAACACTTGAGCAGGTGGCGGATACGCTGGTTGCCTTGCTGTTCGGGCGATTTGTCGAATGCTTGTGCGC CGTTGCCAAAACGGGTCTCGGCAGCCGGTGAATGTCCATCCGTGGGCACTTGCGGGTTATACATGCAAAAACTCCTTATCAGAGCCTGATCAGGAAAAAA TGAGCGCTCTTGGTTAATAAGACGAACGAGCGAGCAAAATCATGAAGTCCCGAATGTAGAAATTTTGTCGGTATCGGTTTTGTCACATTCGCGCCGCCTT AAATAAACGCCCCTCGCGCTAAATTATCCCTGCTGGTTTGCGTTCTTACGGTGGGGTTATTACCCCTTGTGAGACGGTTAAATCTGACGGTGGAGTCTGC
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| DNA Sequence for Gene |
>O204_RS132505
GTGATTATTTCCAATGGGTTGTCCAGGGTAGGTATGGTCGGAGTGTTGCTGGGGTTGAGCCTGGCTGCTTCGGCGCGGGAACAGGTGACGCAAGCCTCGG CGGATATCCGTCGCACCAGTTACGGCGTGCCGCATATCCGCGCCAACGATGAGCGTGGCCTGGGCTTCGGCATTGGCTACGCCTACGCCCAGGACAACCT GTGCCTGCTGGCCAATGAAGTGGTCACGGTAAATGGCGAGCGCGCCACGTTCTTCGGCGCCGAGCAGGTGACCCTCGAAGCGCGCAACAACCTGGCCAGT GACGTCTTCTTCACGTGGCTGAATACGCCGGAATCGGTCGCCGCGTTCTGGAAGGCGCAGAGCCCGCAGATCCAGCAGCGCATCGAAGGTTACGTGGCCG GCTACAACCGCTACCTGAAAGAGCAGGGCGCTCCGGCGCAGTGCCAGGCCGCGTGGGTGCGGCCACTGGTGCCTGAAGACTTGGTCAAGCTGACCCGTAG GCTATTGGTGGAAGGTGGTGTCGGCCAATTCGCTGAAGCCCTGGTCGGCGCGACGCCGCCCCAAACCACCACCGGTGTAGCGACCAACGCCCAGGCCTTT GAACTGGCCACCGCCAATCAGCAACGCTTCGCCTTCGATCGCGGCAGTAACGCCGTGGCGGTGGGCCGTGATCGCTCGTTCAATGGACGCGGCATGCTGC TGGCCAACCCGCACTTCCCGTGGGTGGGCGGCATGCGCTTTTATGAAATGCACCTGACCATCCCCGGCCAACTGGATGTCATGGGCGCCGCGCTGCCGGG GTTGCCGGTGATCAATATCGGCTTCAACCAGCATGTGGCGTGGACCCACACCGTGGACACGTCCAAACACTTCACCCTGTATCGCCTGACCCTGGACCCG AAGGATTCCACGCGCTATATGCTCGATGGCAAATCCGTTGCCATGGATAAAACCACGGTGACGGTGCAGGTCAAACAAGCTGATGGCAGCCTCAAGGGGC AGTCGCACACCGTCTATAGCTCGCAATTCGGCCCGGTGGTGCAATGGCCGGGCAAACTCGACTGGGACAACCGCTACGCCTTCAGCCTGCGTGACGCCAA CCTCGGCAACGACCGCGTGCTGCAACAGTGGTACGCGATGAACCGCGCCGGCAGCCTCGACCAATTGAAAACCTCGGTGCACACCCTGCAAGGCATACCA TGGGTCAACACCGTGGCCGCCGACGACCAGGGCCAGAGCCTGTACATGAACCAGTCGGTGGTGCCCAACGTCAGCGCGGCCAAGCTCGCGCAATGCAGCG ACCCACGCGCCGGCCTGCAGATGATCATGCTCGACGGCGCCCACAGCGCCTGCGCCTGGGACGTCGACCCGCGCGCCGCGCAGGCCGGCATCTTCCCGGC CGATCAGTTGCCGCAGCTGCAACGTACCGACTTCGTGCAGCACTCCAACGACTCGGCCTGGCTGGCCAACCCCAAGGCGCCGCTCACCGGGTTCTCCCCA GTGATCAGCCAGGACCACATCGGCCTCGGCCCGCGTGCGCGTTTTGCCCTGCAGCGCCTGCAGTCCCTGGATAAACCGATCAGCGTCACCGACCTGCAAA ACATGGTGATGGACAACGAGGTGTACCTGGCCGGCCAAGTCATGCCGGACCTGCTCGCCTTCTGCGCCACACACCTCGATGCCGACGCCACCACCCTGCA GCCCTTGTGCGCCCGCCTGAAAAGCTGGGACCAACGCGCCAACCTCGACAGCGGCATCGGCCTGGTGCACTTCATCAACCTGGTGGAGCACCTGCAGCAG ATCCCCGACGCCTGGCGTGTCGCCTTCGACCCGGCTCAGCCCCTCACCACCCCACGCGGCCTCGCCATCGACCGCACGGATGTCGCCAAAGCCCTGCGCG AAGCCATGCTGGCGTCCACCGCCGACGTCGCCAAACTCGGCCTGACCGCCAACAGCACCTGGGGCGACCTCCAAGTCTCCGGCCAAACCCCGATCCACGG CGGGCCGCAGGAACTGGGGATCTACAACGCCATGCAAACCGTACCCCGCGACGACGGCAAGCGCGAAGTCGTCAGCGGCACCAGCTACCTGCAAATCGTC ACCTTCGACGACCAGGGGCCCCATGCCCAAGGCGTACTCGCGTTCTCCGAGTCGAGCAACCCAGCGTCCAAACACGCCAAGGACCAGACCCAAGCCTTTT CCCAGAAAAAACTCAGCCCGCTGCCCTTCACCGAAGCCCAAATCAAGGCCGACCCGCAGTACCAACACCTGCACATCAAAGAGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCAGCCACGCAACCCCTTGATGCCAATACGAAATATTTTTGAAATCAAGGGGTTGCACGCATTGGCAAATACGTACATAATGGCGCCCATCGAACGCAT CGAAGCATTAAAAACTTCAATGTATTCAATGAGTTAGAGTAGAGGCAGGGCTTTACCGTCCACTCAAGTTTTTACGCGGTGAGTGTCAGCAGTCAGGACA TTGATCGTTTGAGGCCGAGTAGCAAAATGGTTATGCAGCGGATTGCAAATCCGCCTACGCCGGTTCGATTCCGACCTCGGCCTCCACTCTTAGAAACCCC GTAGATTAACGTCTACGGGGTTTTTTATTGGCTGCGATTTGGGCATCGCTTCCGCAATTTTTCGGATCGCTTCCGCATCCCTACCTTTTTTCGGGAAATT TAAGACGTCGTTATCGGTATGCCTCTCCCCGATTGGGCGTGGGATTGTGCTCGAGGCTAAGGAGCCTCAGCGTCTACTAACGGCCAGAAGCAGCCCTTCG
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| Amino Acid Sequence |
>acyl-homoserine lactone acylase subunit beta
MIISNGLSRVGMVGVLLGLSLAASAREQVTQASADIRRTSYGVPHIRANDERGLGFGIGYAYAQDNLCLLANEVVTVNGERATFFGAEQVTLEARNNLAS DVFFTWLNTPESVAAFWKAQSPQIQQRIEGYVAGYNRYLKEQGAPAQCQAAWVRPLVPEDLVKLTRRLLVEGGVGQFAEALVGATPPQTTTGVATNAQAF ELATANQQRFAFDRGSNAVAVGRDRSFNGRGMLLANPHFPWVGGMRFYEMHLTIPGQLDVMGAALPGLPVINIGFNQHVAWTHTVDTSKHFTLYRLTLDP KDSTRYMLDGKSVAMDKTTVTVQVKQADGSLKGQSHTVYSSQFGPVVQWPGKLDWDNRYAFSLRDANLGNDRVLQQWYAMNRAGSLDQLKTSVHTLQGIP WVNTVAADDQGQSLYMNQSVVPNVSAAKLAQCSDPRAGLQMIMLDGAHSACAWDVDPRAAQAGIFPADQLPQLQRTDFVQHSNDSAWLANPKAPLTGFSP VISQDHIGLGPRARFALQRLQSLDKPISVTDLQNMVMDNEVYLAGQVMPDLLAFCATHLDADATTLQPLCARLKSWDQRANLDSGIGLVHFINLVEHLQQ IPDAWRVAFDPAQPLTTPRGLAIDRTDVAKALREAMLASTADVAKLGLTANSTWGDLQVSGQTPIHGGPQELGIYNAMQTVPRDDGKREVVSGTSYLQIV TFDDQGPHAQGVLAFSESSNPASKHAKDQTQAFSQKKLSPLPFTEAQIKADPQYQHLHIKE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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