Pseudomonas fluorescens EGD-AQ6, O204_RS133600
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens EGD-AQ6 contig6, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGTGAAGCGGAAAAGCTGCGGGAGCTGTGCTCGCGCTATAAGACCCAACTGATCATCAACGACGACGCTGAACTGGCCGCGCGCCTCGGCGTCGGCGTGC ACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGGGCCCTGCTCGGCTCCAAGGCGATCATCGGTTCCACCTGCCACAGCCAGATCGAACTGGCCGA GCAGGCGGCCAAGGAAGGCGCCAGTTATGTCGCCTTCGGCCGCTTCTTCAATTCCAACACCAAGCCTGGCGCGCCTGCCGCGACCGTGGAGATGCTGGCC CAGGCCCGCACACGTTTGCAGCTGCCAATCTGCGTGATCGGTGGCATCACCCTGGAGAACGCCGAGCCCTTGGTGGCCCATGGCGCCGACCTGCTGGCGG TGGTGCACGGCCTGTTTGGCGCCGACAGCACCCAGGAAGTCACGCGCCGCGCCCGTGCGTTCAACGCCCTTCTTAAGATTTGATTTCAGAGAGCCCGATC
|
|
| DNA Sequence for Gene |
>O204_RS133600
ATGTCCCGTTCCGAAACGCTGTTTGCCAATGCCCAGAAACACATCCCCGGCGGTGTGAACTCCCCCGTGCGTGCGTTCAAGAGCGTGGGCGGCACGCCGC TGTTCTTCAAGCACGCCGAAGGCGCCTACGTCACCGACGAAGATGACAAACGCTACGTGGACTATGTCGGTTCCTGGGGCCCGATGATCCTCGGCCACAG CCACCCGGACGTGCTGGATGCGGTGCGCAAGCAGCTGGAACACGGCCTGTCCTACGGCGCGCCGACCGCCATGGAAACCGAGATGGCCGACCTGGTCTGC TCGATCGTACCGTCGATGGAAATGGTGCGTATGGTCAGTTCCGGCACCGAAGCCACCATGAGCGCGATCCGCCTGGCCCGTGGTTTCACCGGCCGCGACA GCATCATCAAGTTTGAAGGCTGCTACCACGGTCACTCCGACAGCCTGCTGGTGAAAGCCGGTTCCGGCCTGCTGACCCAAGGCGTGCCAAGCTCCGCCGG TGTGCCGGCGGCATTCGCCAAACACACGCTGACCCTGCCGTTCAACGACATCGCCGCCGTCGAGCAGATGCTCAATGAAGTGGGCAAGGACGTGGCGTGC ATCATCGTCGAGCCGGTGGCCGGCAACATGAACTGCGTACCACCGGCACCAGGCTTCCTCGAAGGCCTGCGCGCGCAGTGCGACAAACACGGCGTGGTGC TGATTTTCGACGAAGTGATGACCGGTTTCCGCGTCGCGCTCGGCGGCGCCCAGGCTCACTATGGTGTCACGCCGGACCTGAGCACTTTCGGCAAGATCAT CGGCGGCGGCATGCCGGTGGGCTGCTTCGGCGGCAAGCGCGAAATCATGCAACACATCGCGCCGTTGGGCCCGGTGTACCAGGCGGGCACCTTGTCGGGT AACCCGCTGGCCATGGCCGCCGGCCTGACCACCCTGCGCCTGATCAGCCGCCCGGGCTTCCACGCCGAGCTGACCGACTACACCACGCGCCTGCTGGACG GCCTGCAACAGCGCGCCGATGCCGCCGGCATCCCCTTTGTTACCACCCAGGCGGGCGGGATGTTCGGCCTGTATTTCAGCGGTGCCGACGATATCGTGAC GTTTGATGACGTAATGGGCAGCGACGCCGATTTGTTCAAGCGTTTCTTCCACTTGATGCTGGAAGGCGGTGTGTACCTGGCGCCAAGCGCTTTCGAAGCC GGCTTCACCTCGATCGCCCATGGCGAAGCCGAGCTGAAATTGACCCTCGATGCCGCCGAGCGCGCCTTTGCTGCACTGAAATAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TTGGCCGAAAAAATCAGGCACCGCGCAAACGGTGTCTGATTTGCTACTTTGCTTACAGAGATTTCCGCGTTTTTTAGAGAAATCACCTGCAATCCGGCAG ATAACTTGCCCAAGCAGCAGAAAAACGAGTAAAGACTTTGTAAGCAGAGGCCTGCTTATTTCATAATGCGCGCTTATTGGATCCCCCGAGGATCCGCGCG CCCCGTCAGAGGTAAGTCGATTCCCATGAAACGCACCGGCCGCACCCTGGTTCTGGGCTGCCTGTTGCTCCTTCAGCCGCTGCTGGCGCATGCACAAGCA GGCGGCAACTCGTTGTTAATCCCAGCGATGGGTCGTTGCACCCTCAATACCCAGCCAGACAGCCAGGCCGAAGCCTTGAGCGCGTGCCAGAAACAGGCCG ACGGCGGGGATGCGCAGGCGCAATACGAGTTGGGCGAGTACTTCCACGACAGTAAAAACCCGGCCCGCGACCTCAACAAGGCGTTGAGCTACTTCGAGAA
|
|
| Amino Acid Sequence |
>glutamate-1-semialdehyde 2,1-aminomutase
MSRSETLFANAQKHIPGGVNSPVRAFKSVGGTPLFFKHAEGAYVTDEDDKRYVDYVGSWGPMILGHSHPDVLDAVRKQLEHGLSYGAPTAMETEMADLVC SIVPSMEMVRMVSSGTEATMSAIRLARGFTGRDSIIKFEGCYHGHSDSLLVKAGSGLLTQGVPSSAGVPAAFAKHTLTLPFNDIAAVEQMLNEVGKDVAC IIVEPVAGNMNCVPPAPGFLEGLRAQCDKHGVVLIFDEVMTGFRVALGGAQAHYGVTPDLSTFGKIIGGGMPVGCFGGKREIMQHIAPLGPVYQAGTLSG NPLAMAAGLTTLRLISRPGFHAELTDYTTRLLDGLQQRADAAGIPFVTTQAGGMFGLYFSGADDIVTFDDVMGSDADLFKRFFHLMLEGGVYLAPSAFEA GFTSIAHGEAELKLTLDAAERAFAALK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|