Pseudomonas fluorescens EGD-AQ6, O204_RS134360
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens EGD-AQ6 contig6, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACTCAAGGCCTCAACGGCTTCGAACCTTACGTAGAAAAGAAAGGTGAGGAGTACATGGGCGAGCCCATGCGCGACCACTTCACCAAAATCCTGAACAAGT GGAAACAGGACTTGATGCAGGAGGTCGACCGCACGGTTGACCATATGAAGGACGAAGCAGCCAACTTCCCTGATCCGGCCGATCGTGCCAGCCAGGAAGA AGAGTTCGCCCTTGAACTACGCGCCCGTGATCGCGAGCGCAAGTTGATCAAGAAGATCGACAAGACCCTGCAGCTGATCAAGGACGAAGAATACGGCTGG TGCGAATCCTGCGGTGTCGAGATCGGTATTCGTCGCCTGGAAGCCCGCCCAACCGCGGACCTCTGTGTAGACTGCAAGACCTTGGCCGAAATCAAGGAAA AACAGGTCGGCAAGTAATCCAGCCGAACTGAACGAATGGGGCGTGCGAACGCCCCATTTTTGTTGCTGGCGTTTACCGAATTTCCAGTAGTATCCGGCCC
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| DNA Sequence for Gene |
>O204_RS134360
ATGACAGCCTCTACCTATATCGGGCGCTTCGCCCCCACGCCCAGCGGCCATTTGCATTTCGGTTCTCTGGTCGCCGCCCTCGCCTCCTACCTCGACGCCC GCGCCAACCAAGGCCGCTGGCTGATGCGCATGGAAGACCTTGACCCGCCCCGCGAAGAGCCCGGTGCCCAGGCGGCAATCCTGCACGCACTGGAAAGCTA TGGCTTTGAATGGGACGGCGAACTGGTCCGACAAAGCGAGCGGCACGATGCCTACGCCAACGTGCTGAACGGCCTGTTCAACCACGGCCTGGCCTACGCC TGCACCTGCTCACGCAAACAACTGGAGCCTTACAACGGCATCTACCCCGGCCTGTGCCGTAATGTTGGTCACGCCCAGCAAGACGCCGCCATCCGTCTGC GCGTTCCCGAACTTGAGTACCACTTTACCGACCGCGTCCAAGGCGAATTCCGACAGCACCTGGGCCGCGATGTAGGCGACTTCGTCATCCGTCGCCGCGA CGGCCTTTATGCCTATCAATTGGCTGTGGTGCTCGACGATGCCTGGCAAGGTGTGACCGACATCGTGCGCGGTGCCGACCTGCTCGACTCCACGCCACGC CAGCTTTACCTGCAAGAACTACTGGGCCTGCGCCAACCACGCTACCTGCATGTGCCGCTGATTATTCAGCCGGACGGCAACAAGTTGGGCAAATCCTACC GCTCCCCGCCACTGACACCCGACCAGGCGACGCCTTTGCTATTGAGAGCACTGCGCGCCCTCGGCCAGCAACCCGGCGCTGAGCTGTTGCACGCCAGCCC ACGGGAGCTGCTGGATTGGGGCATTGCGCACTGGGATGCCAGCCGGATCCCGCGCACACTCACGCTGGCCGAAGCGCAATTGAGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGGCGCTTGCAGCTTGCCCGGCATCCGTTACCATCGCCGCACGTTTTTACACAGAGGCCAACATGTACATCTATCGATTGGTCCTGCTGCTGGTCGTCGG GATCTACCTGTTCTCCCCCGCCATCATGGATTGGTGGATCGACGCCACGGGCGCCTGGTACCGCCCTTATCTGCTGTGGCTGATCCTGATCGTCGTGACT TTCATCCTGCAGAGCCAAAAAGATGCCGATGAGCTTTAGCCTCACCCAGATGCTGCTGATCAGCGCCGCCTACCTGGCCGCGCTGTTCGGGGTGGCCTGG ATCAGTGAGCGCGGAATGATTCCGCGGGCGATCATTCGCCATCCGTTGACCTACACCCTGTCCCTCGGCGTATACGCCAGTGCCTGGGCGTTCTATGGCA CTGTGGGCCTGGCCTATCAGTACGGCTATGGCTTTTTGTCCAGTTACCTAGGCGTGTCCGGCGCCTTTTTGCTGGCACCGGTGCTGCTGTACCCGATCCT
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| Amino Acid Sequence |
>glutamyl-Q tRNA(Asp) ligase
MTASTYIGRFAPTPSGHLHFGSLVAALASYLDARANQGRWLMRMEDLDPPREEPGAQAAILHALESYGFEWDGELVRQSERHDAYANVLNGLFNHGLAYA CTCSRKQLEPYNGIYPGLCRNVGHAQQDAAIRLRVPELEYHFTDRVQGEFRQHLGRDVGDFVIRRRDGLYAYQLAVVLDDAWQGVTDIVRGADLLDSTPR QLYLQELLGLRQPRYLHVPLIIQPDGNKLGKSYRSPPLTPDQATPLLLRALRALGQQPGAELLHASPRELLDWGIAHWDASRIPRTLTLAEAQLS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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