Pseudomonas fluorescens EGD-AQ6, O204_RS135535
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens EGD-AQ6 contig5, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTTGGCCCACGGTGTCTCGGCCGCTGCCCTCTTTATCCTGAGTGGCCAGTTGTACGAGCGCCTGCACACCCGTGACATGCGTGAAATGGGTGGCGTGTGG TCACGCATCGCGTACCTGCCGGCGATCAGCCTGTTCTTCGCCGCCGCGTCGCTGGGCTTGCCAGGCACCGGTAACTTCATCGGCGAGTTCCTGATCCTGA TGGGTGCCTTCGTGCAAACGCCGTGGATCAGCGCCATTGCAACGTCCGGCCTGGTGTTCGGTTCGGTCTACTCGCTGATCATGATCCACCGCGCCTACTT CGGCCCGGCCAAGTCCGACACCGTCCTGCAAGGGATGGATGCTCGCGAACTGATCATGGTGCTCGGCCTTGCGGTGCTGCTGATTTACATCGGCGTGTAC CCGCAACCGTTCCTGGACACTTCTGCCGCGACGATGCATGGCGTGCAGCAGTGGTTCGGCACCGCCTTCTCTCAACTCGCTTCGGCCCGGTAAGAGCGCT
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| DNA Sequence for Gene |
>O204_RS135535
ATGGAATTCACGATCCAACACTTTATCGCGCTTGCGCCGCTGCTGATTACCAGCCTCACCATCGTGGTGGTGATGCTGGCGATCGCCTGGCGCCGCAATC ACTCGCAAACGTTCCTGCTGTCCTGTGCCGGTCTCAACCTGGCCCTGCTGTCGATCATCCCGGCCCTCAAGGTCGCGCCTCTGGCGGTAACGCCATTGAT GATGGTGGATGACTTCGCACTGCTGTACATCGCGCTGATCCTGGTCGCGACCCTGGCCTGTGTCACCCTCGCCCACGCCTACCTTGGCGAAGGCGGTACC GGTTACCCAGGCAACCGCGAAGAGCTGTACCTGCTGATCCTGCTGGCTGCGGCCGGCGGCATCGTGCTGGTCAGCGCGCAGCACCTGGCGGGCCTGTTCA TCGGCCTGGAACTGCTGTCGATCCCGACTTACGGCCTGGTGGCCTACGCCTTCTTCAACAAGCGCTCCCTGGAAGCCGGCATCAAGTACATGGTGCTGTC GGCTGCCGGTTCGGCGTTCCTGTTGTTCGGTATGGCCCTGCTCTATGCAGAAGCTGGCAACCTGAGCTTCACCGGTATCGGTCACGCCCTGGCGGCCACC AGCATGCCTGCGCCAATTGCCCAACTGGGCCTGGCCATGATGCTGATCGGCCTGGCATTCAAGCTGTCGCTGGTGCCCTTCCACTTGTGGACCCCGGACG TGTACGAAGGCGCCCCGGCGCCGGTGGCTGCGTTCCTGGCCACTGCGTCGAAAGTGGCTGTGTTTGCGGTGATGGTGCGTCTGTTCCAGATCTCCCCTGC CGCCAACACAGGTGTGCTGAGCACCGTACTGACCGTGATCGCCATCGCGTCGATCCTGTTCGGCAACCTGCTGGCCCTGACCCAGAACAACCTCAAGCGT CTGCTGGGTTACTCGTCCATCGCTCACTTCGGCTACCTGCTGATCGCCCTGGTGGCGAGCAAAGGCCTGGCCGTGGAAGCCATGGGCGTGTACCTGGTCA CCTACGTGATCACGAGCCTTGGCGCATTCGGCGTGATCACGCTGATGTCCTCGCCGTTCAAAGGCCGTGACGCCGACGCCCTGTATGAATACCGCGGCCT GTTCTGGCGCCGTCCGTACCTGACTGCCGTACTGACCGTGATGATGCTGTCCCTGGCCGGCATTCCGCTGACGGCGGGCTTCATCGGCAAGTTCTACATC GTCGCTACCGGTGTTGAAGCCCACGAATGGTGGTTGGTTGCCTCCCTGGTACTGGGCAGCGCCATCGGCGTGTTCTACTACCTGCGCGTGATGGTCACCC TGTACCTGATCGAGCCAAACCTGCGCCGTGTGGATGCCGAGCTGCACTGGGAACAGAAAGCCGGTGGCGTCATGCTGCTGGCCATCGCCCTGCTCGCGTT CTTCCTGGGCGTGTACCCACAACCGTTGCTCACCCTGGTGCAGCACGCGGTGCTGGGCGTTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCGCTTAGCGGGATGCGGTAAACAAAACGGCGCCTTCGGGCGCCGTTTTGCGTTTCTGGGGCCGGTGCTTTTACCCTCCCCTGCTCACGGAAATGTCCTC CTCCAGCTGCCTCCTTATCTGGCATCTACCCGATGGAGGCCGCCGTATGGTGTTTGCGTTCTAGGAAAGTTCCCACAGCAAGGTCACTTGACCCAAGGCG CGTGGGCCACCAAACTATACGCAGGCTACGTACAGAATATGGATGCTCTATTTATCGAACTGCCGGCCTTCGAGCGGCATCGCAAGGACTATCTGAGTGA CGAGCTTTTCCACGGTTTTCAACAGGCGTTGATGAAGAACCCGGAAGCGGGAGACGTGATCGAGGGAACAGGCGGGTTACGCAAGGTTAGCTTTGTCGAC GAACGACGCAACAAAGGCAAGCGCGGTGGCCTGCGGGTCATTTACTACGGGTGGTCAGACGGCACGCAATTCTGGTTATTCACCCTGTACGGCAAACACG
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| Amino Acid Sequence |
>NADH:ubiquinone oxidoreductase subunit N
MEFTIQHFIALAPLLITSLTIVVVMLAIAWRRNHSQTFLLSCAGLNLALLSIIPALKVAPLAVTPLMMVDDFALLYIALILVATLACVTLAHAYLGEGGT GYPGNREELYLLILLAAAGGIVLVSAQHLAGLFIGLELLSIPTYGLVAYAFFNKRSLEAGIKYMVLSAAGSAFLLFGMALLYAEAGNLSFTGIGHALAAT SMPAPIAQLGLAMMLIGLAFKLSLVPFHLWTPDVYEGAPAPVAAFLATASKVAVFAVMVRLFQISPAANTGVLSTVLTVIAIASILFGNLLALTQNNLKR LLGYSSIAHFGYLLIALVASKGLAVEAMGVYLVTYVITSLGAFGVITLMSSPFKGRDADALYEYRGLFWRRPYLTAVLTVMMLSLAGIPLTAGFIGKFYI VATGVEAHEWWLVASLVLGSAIGVFYYLRVMVTLYLIEPNLRRVDAELHWEQKAGGVMLLAIALLAFFLGVYPQPLLTLVQHAVLGV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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