Pseudomonas aeruginosa PA7, PSPA7_5780 (pilN)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Sequence Data

Strain Pseudomonas aeruginosa PA7 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
GACACCGACCAGTTGACCGTGGCGGTGGTGGACATCGGCGCGACCATGACCACGCTCAGCGTCCTGCACAACGGCCGCACCATCTATACCCGCGAGCAGT TGTTCGGCGGACGCCAGCTCACCGAGGAGATCCAGCGGCGCTACGGGCTTTCGGTGGAGGAAGCCGGTCTCGCCAAGAAGCAGGGTGGTCTTCCGGATGA CTACGACAGCGAAGTCCTGCGTCCGTTCAAGGACGCCGTGGTCCAGCAGGTTTCCCGTTCGCTGCAGTTCTTCTTCGCCGCCGGCCAGTTCAATGACGTC GACTACATCGTCCTGGCGGGCGGCACGGCGTCGATCCAGGACCTCGACCGGCTGATCCAGCAGAAGATCGGCACCCCGACCCTGGTCGCCAACCCGTTCG CCGACATGGCGCTGAACGGCAAGGTGAACGCCGGTGCCCTGGCCAGCGACGCGCCGGCGTTGATGATCGCCTGCGGCCTGGCGTTGAGGAGTTTCGACTG
DNA Sequence for Gene
>PSPA7_5780 |pilN
ATGGCACGGATCAACCTTCTACCCTGGCGCGAAGAGCTGCGCGAGCAGCGCAAGCAGCAGTTCCTGGTGATCCTCGGTGGCGTGCTGGTGGCCTCGGCGG CCCTGGTGTTCCTCGGCGACCAGTACTTCACCGCCGCCATCGAGAACCAGAATGCACGCAACGACTTCCTGCGCAAGGAAATCGTCGTGCTGGACGCGCG GATCAAGGAGATCAGCGAGCTGAAGTCGCGCCGCCAGCAGTTGCTCGAGCGGATGAAGATCATCCAGGACCTGCAGGGCAACCGCCCGATCATCGGCCGG GTGTTCGACCAGCTCGTGCGCACGCTGCCCGACGGCGTGTATTTCACCGACCTGAAGATGACCGGCAGGAATATCGCCATCGCCGGCGCGGCCGAGTCCA ACAACCGTGTCTCCAACCTGATGCGCAACATGGACGCGTCCGAATGGCTGACCGCGCCGACCCTGAACGAGGTCAAGGCGGTGACCCAGGGGGCGGTGGA CCAGGCCAACGTGTTCCAGTTGACCGTGCAGCAGACGCAGCCGGGCGAGCAGGATGCCAAGGCCAAGAATGGGGTTGCGCAAGGAGCCAAGAAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTCTGGCCAGTTCCCTGGAAAGTCTGCGCAAGATCGACATCAACGATCTCGACCTGAACAACATCGGTTCCTGGCCGGCGGCGGTCAAGGTCATCGTCTG CGTGCTGCTGACCGCGGCGGTGCTTGCGCTGGGCTACAACTTCCACCTGAGCGACATGCAGGCGCAGCTGGAGCAGCAGGCCGCGGAGGAGGAGACGCTC AAGCAGCAGTTCTCCACCAAGGCCTTCCAGGCCGCGAACCTGGAAGCCTACAAGGCGCAGATGAAGGAGATGGAAGAGTCCTTCGGCGCCTTGCTGCGGC AACTGCCCAGCGACACCGAGGTGCCCGGCCTGCTCGAGGACATCACTCGCACCGGACTGGGCAGCGGGCTGGAGTTCGAGGAGATCAAGCTGCTCCCCGA GGTCACCCAGCAGTTCTACATCGAGCTGCCGATCCAGATCAGCGTGGTCGGTGGCTATCACGACCTGGCGACCTTTGTCAGCGGCGTCTCCAGTCTGCCG
Amino Acid Sequence
>type 4 fimbrial biogenesis protein PilN
MARINLLPWREELREQRKQQFLVILGGVLVASAALVFLGDQYFTAAIENQNARNDFLRKEIVVLDARIKEISELKSRRQQLLERMKIIQDLQGNRPIIGR VFDQLVRTLPDGVYFTDLKMTGRNIAIAGAAESNNRVSNLMRNMDASEWLTAPTLNEVKAVTQGAVDQANVFQLTVQQTQPGEQDAKAKNGVAQGAKK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site