Pseudomonas fluorescens EGD-AQ6, O204_RS138495
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens EGD-AQ6 contig3, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCTTATGTGAACTACTTCCGCTCGATCCCGCTGCTGCTGGTGATCACCTGGTTTTACCTGGCGGTGCCGTTCGTATTGCGCTGGATCACCGGCGAAGACA CCCCGATCGGTGCGTTCACCTCCTGCGTCGTGGCCTTCATGATGTTCGAAGCCGCGTACTTCTGCGAGATCGTACGGGCCGGCGTGCAGTCGATCCCCAA AGGCCAGATGGCAGCAGCACAGGCCATGGGCATGACCTACGGCCAGACCATGCGCCTGATCATCCTGCCCCAGGCGTTCCGCAAGATGACCCCGTTGCTG CTGCAACAGTCGATCATCCTGTTCCAGGACACCTCGCTGGTCTACACCGTGGGCCTGGTGGACTTCCTCAACTCCGCCCGCTCCAACGGCGACATCATCG GCCGCTCCAATGAGTTCTTGATCTTCGCCGGTGTCGTCTACTTCATCATCAGCTTTTCCGCCTCGCTGCTGGTCAAGCGTCTGCAAAAAAGGTTTGCCGT
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| DNA Sequence for Gene |
>O204_RS138495
ATGATCTCTATCAAGAATATCAACAAGTGGTATGGCGACTTCCAGGTGCTGACCGATTGCAGCACCGATGTCAAAAAAGGCGAAGTGATCGTGGTGTGCG GGCCGTCGGGCTCGGGTAAGTCCACCCTGATCAAGTGCGTCAACGCACTGGAACCGTTCCAGAAGGGCGACATCGTGGTCGACGGCACCTCCATCGCCGA CCCGAAGACCAACCTGCCGCAGCTGCGTTCGCGCGTGGGCATGGTGTTCCAGCACTTCGAGCTGTTCCCGCACCTGACCATCACCGAGAACCTGACCATC GCGCAAATCAAGGTACTTGGTCGCAGCAAGGAAGAAGCGACCAAGAAAGGCCTGCAACTGCTTGAGCGTGTGGGCCTGTCGGCACACGCCCACAAGCACC CGGGTCAGCTTTCCGGCGGCCAGCAACAACGTGTGGCGATTGCCCGCGCCCTGGCCATGGACCCGATCGTCATGCTGTTCGACGAACCGACCTCGGCCCT CGATCCGGAAATGGTCAACGAAGTACTCGACGTAATGGTGCAGCTGGCCCAAGAAGGCATGACCATGATGTGCGTGACCCACGAAATGGGCTTCGCCCGC AAAGTGGCCGACCGCGTGATCTTCATGGACGCCGGCAAGATCATCGAAGACTGCCCGAAAGAAGAGTTTTTCGGCGACATCAGCGCCCGCTCCGAACGCG CGCAGCACTTCCTTGAGAAAATCCTGCAGCACTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AAAAGCCACAGCTTGCTCCTCCTATAGGAGCGAGCTTGCACGCGAAAAACGGCAACGATGACGCGCACATCCTGGATGAACGCGGTGCCCTTGGTTTTTT CGCGAGCGAGCTCGCTCCTACAGGAAGGGTGAGCGGTAGCTGACCCAAGGCATCTGTGATGAAATGCGACCCCAACCAATTTCGCGCCGCACCGCCATCA CTTGCCGTGAAACCACGCCTGATCCGCCAACTGTTCCTGCCGCCGTTGATCATCGCCCTGATGATCGGCCTGGGTTATATCGGCTTCTGGGTCAGCGAGT ACTACGGCATCCGCACCCTCAGCGACACTGGCGAACGCCAGCTGGAGCTGCATGCCCGCACCGTCGAAAGCGAACTGAGCAAATACACCTACTTGCCCAG CCTGTTGGAACTGGAGTCCAGCGTGTCCGCGCTGCTGGCCGACCCCAATCAGGAAACCCGCAAGACCGTCAACGATTACCTCGAAGGCCTGAACCGACGC
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| Amino Acid Sequence |
>arginine ABC transporter ATP-binding protein
MISIKNINKWYGDFQVLTDCSTDVKKGEVIVVCGPSGSGKSTLIKCVNALEPFQKGDIVVDGTSIADPKTNLPQLRSRVGMVFQHFELFPHLTITENLTI AQIKVLGRSKEEATKKGLQLLERVGLSAHAHKHPGQLSGGQQQRVAIARALAMDPIVMLFDEPTSALDPEMVNEVLDVMVQLAQEGMTMMCVTHEMGFAR KVADRVIFMDAGKIIEDCPKEEFFGDISARSERAQHFLEKILQH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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