Pseudomonas fluorescens EGD-AQ6, O204_RS140455
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens EGD-AQ6 contig28, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTCGACGGCACACTCCTTGATCTTGAAGGCGTAGGGCGCGCTTTGCGCAGCGCGTGGTCGCGGTTGTCGACATCGGTTCGTGGCGCTGCCGCTGCCGTGG CCGGGCCCTCGGTGATCACGCGGATGATTGATCTGGAAGCCGGCCTCACCGACGATGAGATGGCCTGGATGATCCAGATGGAGGCAGACCAGTACATTCC TTATCCGCTGGATGACGTGGCTATCGACTTTCAAGTGCGTGGGCCGACGGCCCTGGACCCGAACCGGGTCGAGGTATTGCTGGCCGCCTGCTTGAAGGAA CAAGTGGAAGCCCGCGAGGCGGTTTTGGCCTTGGCGGGGCTGGTGCCGAAGGTGATCGATGTCGAAGCGTTTGCATTGGCGCGCGCTTGCAGTCAGGATT TCGCCAGCTTCACGCCGAGTCATCGCGTCGATGGTGCACAATGGGCCGTGGATGCCCAGGGGATGGGAATTGCTTGCGGGTTGGCCCTGAGGAGTTTCGC
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| DNA Sequence for Gene |
>O204_RS140455
TTGAAGACACGAATCAACCTACTGCCTTGGCGCCAGGCGCTGGCAGAGCGGCGACGCAAGTATCTACTGGCGTGCTTGCTGGCGTTCGCCTGTGCGGCGC TCGCGGCCGTTTGGCTGGCGGACCAGGTGATCGACCGGGCCATCGATCGTCAAGTGACCCGCAATGACCATCTGGGCAAGGAGATCGTCGGCCTGGATTC ACGCATCAAGACCATCGACGATCTGCAGGAGCAAAGCCAGCAGTTGGCGCAACGCATGAAAGTCGTTCAAGACCTGCATGATGCCCGCTCGTCCGGTGCT CAACTGTTGGACCAACTGGCGCGCGCGGTCCCCGACGGCGTGCACCTGCATGAGGTGGTGGCCAAGGGGGATACGGTCAGTATCAGCGGCAGCGCTGAAT CCAGCCAGGACATCGCTCAATTGATGCGCCGCCTGGAAGCCGCGGAAGGCGCCCATTCCACTCGGTTGCAGCATGTGCGAACGGATGGCGCGCGCGGCAA CAATCAATTCCAGCTGATGGTGCGTCAGGGAGAGTCCTCCGAGGCTCAACCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCTGCCAAGGCTCAATCTTTCTGCACTCACTCACAACGCTGCAAAATGGTCCCTACCTGGCAAGGCCCTGTTGGGTTGTGCGCTGGCGGGCGTGGTGTT TGTGGTGGGCGACCTTGTGTACCTGAGCCCTTCGTGGGAACGGTTGCACCAGGTCGAGGCGCGGGAAGTGGCCCTGCAGCAGCAAGTCGCACAAAAGACT GGGCTGGCCGCCAGCCTTGCAGCGCGTACGCAGCAGCTCCAACTGATGCAAGCGAAGGTCGACGAACGTTTGCAGGCGTTGCCTGGCGAGTCCGAGATGC CTGGTTTGCTGGAAGACATCGCGCGTCTGGCGCTGGCCAACGGGTTGGTGGTCGAGAGCGTCACGCCTTTGGATGCGTTGTCCAGGTCGTTCTTTCACGA ACAACCCGTGCAGGTCGGCGTCGCGGGGGCTTATCACGACCTGGCGATGTTCCTGGCGGGCCTGGGTGGCCTGTCGCGCATCGCCACGGTGCACGATGTG
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| Amino Acid Sequence |
>fimbriae biosynthesis protein
MKTRINLLPWRQALAERRRKYLLACLLAFACAALAAVWLADQVIDRAIDRQVTRNDHLGKEIVGLDSRIKTIDDLQEQSQQLAQRMKVVQDLHDARSSGA QLLDQLARAVPDGVHLHEVVAKGDTVSISGSAESSQDIAQLMRRLEAAEGAHSTRLQHVRTDGARGNNQFQLMVRQGESSEAQP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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