Pseudomonas fluorescens EGD-AQ6, O204_RS140500

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens EGD-AQ6 contig28, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGGACGGCATCAAACCACTGGCAATCGTCGCGAACGCCGCACAGAACAACGCGGCGACCATCACCGGTTTACGTCCCAGGGTGTCGGAAATCGGCCCGGT AATCAGCAGGCCCAGCGCGAGCATCGCAGTGGACACGGACAGGATCAGACTACTCTGCGCGGCATTGATGGAAAACTCGTGGGACAGCGCCGGCATCATC GGCTGCACGCAATACAGCAGGGCAAAGGTGGCGAACCCCCCGGAGAACAGCGCCAGCACCGTGCGCATGAACATCGGCGTGCCTTTTTCGATGTACGCGT CATTGAGCTGGGCCACTACCTCATCGAGGGCAGTGGGCGGGACTTCTTGAGCAAGTGGAGCGACAGCAGAATTCACAGGGACCTCGGGGAGGAAGAGCGT GCCAGGACCGGCCATGCAAAAAAGAATATAGCTGGCTAATGATTCTTTCCAATATATTGTTCGACCTGTTTGATAGCTTTTACGACCTAATGAGGTTTGC
DNA Sequence for Gene
>O204_RS140500
ATGGAATTGCGTCACTTGCGGTACTTCATTGCCGTCGCCGAAGAACTGCACTTTGGCCGGGCTGCGCAGGTGCTAGGCATCTCGCAGCCGCCGCTGAGCC AGCAGATACAGGCGCTGGAGCAGGAGGTGGGCGCGCGGTTGTTCGAGCGTACCAATCGTCGGGTCGAGCTGAGCGAGGCGGGGCGTTTGTTCCTGCACGA GGCGCGGTTGGTGCTGGCGCAGGTGGACAAGGCGGCGGATGTAGCGCGCCGGGCGCAGTTGGGTGAGCTGGGTGAATTGAAGATCGGCTTCACGTCATCG GCACCGTTTAACTCCAGCATTCCCCAGGCGATCTTTGCATTTCGCCAGGCGTTCCCGGCGGTGCATCTCAATCTGCAAGAGATGAGCAGCACCGAGGTGG CGGAGTCGCTGGTGGACGAGTCGATTCAGGTGGGCTTGATGCGCCCCCTGCCGTTGCCGGACTCACTGAGTGTGGTCGAGTTGATGCGCGAACCGCTGGT GGCCGTCATGAACGCTGGCCACCCGTTGGTAGCAGGCAGTGAGCGTGGCCTGCACCTGGCGCAGCTGGCGGAAGAGCCATTCGTGTTTTTCCCGCGCAGC TACGGCAGTGGACTCTACGCGCAGTTGCTCAGCCTGTGCCGAGACGCCGGTTTCAGCCCGCATTTTGCCCAGGAAGCGGGGGAGGCGATGACCATCATCG GTCTGGTCGCGGCGGGGTTGGGCGTGTCGGTGCTGCCCGCGTCTTACCAGCGCATACGGATTGACGGAGTGGTGTATCGCACCTTGCTGGACCCGGAGGC GGTGACGTCGGTATGGCTGGTGCAGCGAAAAGGCGCGCAGACGCCGATGGCTGCGGCGTTTGTGGAGTTGTTAACGCGTAAATCCGCTCAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCACGCGTACTTCAACGCGAAGCAGATCGAATGGAAGCTGT
Amino Acid Sequence
>LysR family transcripitonal regulator
MELRHLRYFIAVAEELHFGRAAQVLGISQPPLSQQIQALEQEVGARLFERTNRRVELSEAGRLFLHEARLVLAQVDKAADVARRAQLGELGELKIGFTSS APFNSSIPQAIFAFRQAFPAVHLNLQEMSSTEVAESLVDESIQVGLMRPLPLPDSLSVVELMREPLVAVMNAGHPLVAGSERGLHLAQLAEEPFVFFPRS YGSGLYAQLLSLCRDAGFSPHFAQEAGEAMTIIGLVAAGLGVSVLPASYQRIRIDGVVYRTLLDPEAVTSVWLVQRKGAQTPMAAAFVELLTRKSAQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site