Pseudomonas fluorescens EGD-AQ6, O204_RS145275
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens EGD-AQ6 contig2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCCAGAGCTGCCATTGCGCTCGGCCACTTGAGTTGTTTGCCCGTTTTGCCGCGTGTCGGCTAGGGGCCAGGTGCCAGGCTGGGGCAGCCCTTTTTTGAGG TTCACGTCTTCAAAAGAGCGTGAAAAAACGGGTTTTCACAACTTCACAAGAGTGTGGCGAGCAAATGAATAGTTTGGCGTTTGTACAAGCACCATCAGCG TCTGGAACAGCCCAACCACACAGGACCGAGCACGTTTTAAAAACCGGAGCTTGAGCCTGTCCGCTACGGATTGGTTGCATGAATCGCACGCTTTGACCAT AAGTCGAATTGCCACAGGCGCCCATGAATGCGTTCATAGGCAGATTAGCCCGGCAGGAAGCGCGCGCTGAACATGCAAAGAATTGCGAATCGGACATGGC GATCCTGGCCATGGGTAATCTGGGGCAACACGTGAATCGCCCCGTCACTCCTGGCAGCCATGCCGTCAATTTGGTGCTGCAGATTTTGGAGACGCGTTAA
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| DNA Sequence for Gene |
>O204_RS145275
ATGGCGCATAACGAAGCAGTCGACGTAGTACTGGTAGGGGCCGGCATCATGAGTGCCACCCTGGCCGTACTGCTCAAAGAGCTCGACCCCGGCCTCAAGC TGGAAGTCGTTGAGCTGATGGATTCGGGTGCCGCGGAAAGTTCCAACCCGTGGAACAACGCCGGGACCGGCCACGCCGGGCTGTGTGAGCTGAACTACAC GCCCCAGGCCGCCGATGGCTCCATCGACATCAAGAAAGCCGTGCACATCAACACCCAGTTCGAGGTGTCGAAGCAGTTCTGGGCGTACCTGACCAAAAAG GGCACCTTTGGCTCGTCCAAGTCCTTCATCAGCCCGGTGCCGCACCTGAGCTTCGTGCAGGGCGAAAAAGGCGTGGACTTCCTCAAGAAGCGCTTTGAAA CCCTCAGCCAGCACCACGCGTTTTCGGACATGCACTACACCGAAGACCGTAGCGAAATGGCCGAGTGGATGCCGCTGATGATGCCGGGCCGCTCGCTCGA CGAAAAAATCGCAGCCACCCGCGTCATGAACGGTACCGACGTCAACTTCGGCGCACTGACCAACCAACTGCTCAGCCACCTGACCAGTTCGCCAGACGCC CAGGTCAAGTACAGCAAGCGTGTGACCGGACTCAAGCGCAACGGCACAGGCTGGACCGTGAGCATCAAGGATGTGAACAGCGGCAACAGCCGTGACGTGG ACGCCAAGTTCGTGTTCCTCGGCGCCGGTGGCGCGGCCCTGCCGCTGCTGCAAGCCTCGGGCATCGAAGAAAGCAAAGGCTTTGGCGGCTTCCCGGTCAG CGGCCAATGGCTGCGTTGCGACAACCCGGAAGTGGTCAAGCACCACCAGGCCAAGGTCTACAGCCAGGCTGCCGTGGGTTCGCCGCCGATGTCCGTGCCG CACCTGGACACCCGTGTGGTGGATGGCAAGAAATCCCTGCTGTTCGGGCCATACGCCGGTTTCACCACCAAGTTCCTCAAGCACGGCTCGTTCCTCGACC TGCCGATGTCGATTCGCGCCGGCAACATCGGCCCGATGCTGGCTGTGGCCCGCGACAACATGGACCTGACCAAGTACCTGGTCAGCGAAGTGCGCCAATC CATGGAGCAGCGCCTGGAGTCCCTGCGTCGCTTCTATCCGGAGGCGAAAGCCGAGGACTGGCGCCTGGAAGTGGCCGGTCAACGGGTGCAGATCATCAAG AAAGACCCGAAGAAAGGCGGCGTGCTGCAATTCGGTACCGAACTGGTCGCGGCCAAAGACGGCTCGCTGGCCGCCCTGCTGGGCGCGTCTCCGGGTGCTT CGGTGACCGTTTCGATCATGCTGGAGCTGATCGAGAAGTGCTTCCCAAGCAAAGCCGCAGGTGAATGGGCCGCCAAGTTGCAGGAAATTTTCCCGGCACG GGAAAAGGTTCTGGAAACGGACGCCGAGCTGTATCGCAAGATCAACACGCAGAACAACATCAGCCTGGAACTGGTTGCACCTGCCGCCGAGACTGAAAGC TACGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGTCGTGACGCCATAAAAAACGCCCCGCTCTCGTGATGAGAACGGGGCGTTTTTGTGTGCCTCGAATAATCAGCCGCGGGCGTTATCGATCAGCTCGATA TACTCGGCGGCATTACGCTGGTCCTTGATCAGGTCCACGAAGGTCTGCCCATGCTCATCCTTGCCGTCGAGGTCCAGGCCAGCTTCCTTGAAAAAGCCAA GGAACCGTTCGAAGTCGTCGATACGCAGGCCACGGTAGGCCTTGATCAGTTTGTGCAGGGACGGTGAAGTCGCATCGACCGGCTCGAAGTCCAGGAACAA CTTGATCTGATCGTCGCCGATCTCGTCGCCAATCACCTGTTTCTTATCTTTACGCATTACCGACTCCAGCCTGCAGACATTACACGGGAAAAGCAGTTTA CCTGCGGCACGCCAGCTTCGGAAGCGACGCAGAACCAATGTGGGAGCGGGCTTGCCCGCGAATGCGGTGGGTCAGTCAACTTACCTTTAACTGATACTCC
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| Amino Acid Sequence |
>malate:quinone oxidoreductase
MAHNEAVDVVLVGAGIMSATLAVLLKELDPGLKLEVVELMDSGAAESSNPWNNAGTGHAGLCELNYTPQAADGSIDIKKAVHINTQFEVSKQFWAYLTKK GTFGSSKSFISPVPHLSFVQGEKGVDFLKKRFETLSQHHAFSDMHYTEDRSEMAEWMPLMMPGRSLDEKIAATRVMNGTDVNFGALTNQLLSHLTSSPDA QVKYSKRVTGLKRNGTGWTVSIKDVNSGNSRDVDAKFVFLGAGGAALPLLQASGIEESKGFGGFPVSGQWLRCDNPEVVKHHQAKVYSQAAVGSPPMSVP HLDTRVVDGKKSLLFGPYAGFTTKFLKHGSFLDLPMSIRAGNIGPMLAVARDNMDLTKYLVSEVRQSMEQRLESLRRFYPEAKAEDWRLEVAGQRVQIIK KDPKKGGVLQFGTELVAAKDGSLAALLGASPGASVTVSIMLELIEKCFPSKAAGEWAAKLQEIFPAREKVLETDAELYRKINTQNNISLELVAPAAETES YA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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