Pseudomonas aeruginosa PA7, PSPA7_5564
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PA7 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGCCGCGATGGCCGTCCGCTGAGCTTCGCGATGCTCGACATCGACCACTTCAAGCAGGTCAACGACCGTTTCGGCCATCCCATGGGCGACCGGGTGATCA AGGGCCTGGCGCTGTTCCTCAAGCAACGCCTGCGCAAGACCGACCACATCGGCCGTTACGGCGGCGAGGAGTTCGCCGTGGTCCTCCCGGACACCGACCT GGACGCCGCGCGCCTGGTGCTCGACGAGATTCGCCAGCGCTTCGCCGAGATCCACTACCCGGCGCAACCGGCCGACCTGCGCTGCACCTTCAGTTGCGGC ATCGCCGAGCTGACCCCGGACCTCGATATCAAGAGCATGGCCAAGCAGGCCGACGAGGCGCTGTACCGGGCCAAGCACGGCGGGCGCAACCGGATCGAGG TGTACCGTTCCCGAGCCGGCTAATGGCTCTTTGTCATTACGCGGTAACCGAACGGAAATAACCTGCGGTCTCGCCGTTCCGTTGTCGGACGAGACCCGTC
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| DNA Sequence for Gene |
>PSPA7_5564
ATGCGCCTCAAGCAACTCACCAACCTCAACACTCTGCTCCTGCTCACCGTCTGCCTCGCCCTGGGAATCACCCTGTGGTGGTCGCAGCGCGCCATGGAGC GTCCGTTCCAGCTGCTCGATCGCTACCTGGAGCTGTCGCAGCGCTTCGACGAACAGGTCGCGCGCAACATCCGCCAATACCTCGGCAGCGGCGACGCCGT GCGCCAGCAGGCGGCGCTGCAAGCTCTGGATCACCTCGAAGAGGCCCTGCCGCAGCTGCCTCCGGAACTGGCGCGGACCCTCGCGCCGAGCCTCGCGGAC CTGCGCGGGTTCAGCGCCGGCGAGCTGCTCGCCGCCGGCAAGCTCGCCGGCGACCCGCAGGGCCTGTTGCTGCAGGCCGAGCGCGACCTGGCCGGCAACC TGGAGCAATGGTCCGCTTACCTGGAGGCCGCGGCGGATCAACCCCGGGCCGGCGCCTATCGCCCGCCGCTGCTGCTCGCCAGCCTGCACCTGACCCGCCT CAGCCTGGCCCGCGCCAAGCTGGTGGAAAGCGCCAACCCGGCGCTGGCCGGCGACGTCGAGCGCGAGCTGGCCAGCCTGCGCGGGCAGGCCGGGCGGATC GACGCCCTGCCGCTGCTCGGCGTGCTCGACGAGCAGCGCTCGGCCAGCGACGACTTCGCCGCCATGATGGGGCTGGCCGGCGACACCGAGGCCGGCGCCG GCAATGCCGAAGACCGCGGCGTGACCCTGCGACGCGAACTCGCCAGCCTGCTGCAGCGCTATCCGGACGAGCTGCGCCGCACCCGCGACCTGATCGAACG GCGCCAGCAACTGTCCGCCGACACCGGTTCCAGGCTCGATGCGGTGCGCCAGGCCCTGGCCACCCTGGAACCGCAGGTGCGCGGCGAGCGCCAGCGCCTG CAAGGCCAGGTGCGCCTGATCCAGGGTGGGATGATCGTGCTGATCCTGCTCATCGCCCTCGCCATCGACAGCCTGCAACGGCGCCTGGCACGGGTGCTCG GGCAACTGGTGCCGGCGCTCTCGGCCTGGGCCGACGGCGACTTCTCGCGGCCCATCGCCCTGCGTACCCGCACCGAAGACCTGCGCAACCTGGAAGACTC GCTGAACCGCCTGCGCAGCTTCCTTGCCGAGCTGGTCGGCGCGATCCACCGCCGCGCCGAACAGGTCGCCGGCAGCAGCCAGACCCTGGCCGAGGTCAGC AGCGGCCTGCACGCCGGAGTCGAGCGCCAGGCCGGCGATACCGGGCAGATCCGCGACGCCCTCGGCGACATGGAGGCGGCGATCCAGCAGGTTGCCGGCG ATGCCAGCCAGACCGCCGACGCCAGCCGCAGCGCCGGCCAGGCGGTGGAACACGGCCAGCGGGTGATCGGCCAGAGCCTGGGCGGCCTGCGCGAGCTGGT CGACGAGGTGCAGGGCAACGCCCAGTCGATCGAACGCCTGGCCGAGGAGTCGGCGACCATCGGCAGCGTGCTGACGGTGATCCGCTCGATCGCCGAACAG ACCAACCTGCTCGCCCTCAATGCCGCCATCGAGGCCGCCCGCGCCGGCGACCAGGGCCGCGGCTTCGCCGTGGTCGCCGAGGAAGTCCGCTCGCTGGCCC AGCGCACCGCCGGCGCCACCGAGGAGATCCAGCAGCTCATCGGCCGCCTGCAGCAGGCCGCGCGGCAGTCGGTGGAGGCCATGCGCAGCCAGGTCGAGCA CGCCGAACGCACCGCCGAACAGGCTGGCGCGGCGGAGGGCGCGCTGGACGAAGTGGTCGCCGCGATCCACACCATCGGCGTGATGGCCGAACGCATCGCC GAAGGCTCGACCCAGCAGAGCCAGGCGGTCGGCGAGATTCGCTCGCACAGCGAACGCATCCACGCCCTGGGCGGGGAAAACCTGCGCCTGATCGGCCACA GCCGCGAACAGGGCGAGCAACTGCGGCAACTGGGCGGCGACCTGCGCACCACGGTGCAGGCCTTCCGCCTGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCTGCGGCGACGTGCCGCAAGGCGCCGGCGGAACCGCTTCCCGGCGAACCGGTCGGATTCGGTTCAGCGGAACCGGGGCAGGACCTGATCAGCCGCACG GGGCTCGATCGGGCCCGGCTTTCCGCTATCATTCCGGCTTTTGATCCGACGAGATATCCATGCGCCGCCTGCTGACCCTGATCCTCCTGCTGGTCGCCCT GCCCGCCGGCGCGGGCCTGTTCGATAGCCGCCCCTCCGCAACCCTTGGCGGCAGTGTCGATGGCGGCGACTTCCTCAAGGTCGACCAGGCTTTCAAGCCC AGCGTCGAGCGCAGCGACGCGCAGCACGTGCTGCTGCGCTTCGTCAACGCCGAGGGCTACTACCTCTACCGCCACCGCTTCCAGTTCAAGGTCGAGCCAG CCCAGGTCAGCCTCGGCCAGGTGCGGTTGCCGGCGGGCAAGCAGCACCACGACGAGTACTTCGGCGATACCGAGGTCTACTACGACATCGTCGACCTGGA
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| Amino Acid Sequence |
>putative chemotaxis transducer
MRLKQLTNLNTLLLLTVCLALGITLWWSQRAMERPFQLLDRYLELSQRFDEQVARNIRQYLGSGDAVRQQAALQALDHLEEALPQLPPELARTLAPSLAD LRGFSAGELLAAGKLAGDPQGLLLQAERDLAGNLEQWSAYLEAAADQPRAGAYRPPLLLASLHLTRLSLARAKLVESANPALAGDVERELASLRGQAGRI DALPLLGVLDEQRSASDDFAAMMGLAGDTEAGAGNAEDRGVTLRRELASLLQRYPDELRRTRDLIERRQQLSADTGSRLDAVRQALATLEPQVRGERQRL QGQVRLIQGGMIVLILLIALAIDSLQRRLARVLGQLVPALSAWADGDFSRPIALRTRTEDLRNLEDSLNRLRSFLAELVGAIHRRAEQVAGSSQTLAEVS SGLHAGVERQAGDTGQIRDALGDMEAAIQQVAGDASQTADASRSAGQAVEHGQRVIGQSLGGLRELVDEVQGNAQSIERLAEESATIGSVLTVIRSIAEQ TNLLALNAAIEAARAGDQGRGFAVVAEEVRSLAQRTAGATEEIQQLIGRLQQAARQSVEAMRSQVEHAERTAEQAGAAEGALDEVVAAIHTIGVMAERIA EGSTQQSQAVGEIRSHSERIHALGGENLRLIGHSREQGEQLRQLGGDLRTTVQAFRL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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