Pseudomonas aeruginosa PA7, PSPA7_5563

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00072
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other PA7 genes in this class
Two-component regulatory systems Other PA7 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF55073 Nucleotide cyclase IPR029787 Nucleotide cyclase 382 538 1.33E-47
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 250 363 2.1E-27
Gene3D G3DSA:3.30.70.270 - IPR043128 Reverse transcriptase/Diguanylate cyclase domain 376 541 1.1E-52
PANTHER PTHR45138 REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM - - 93 538 3.8E-94
FunFam G3DSA:3.30.70.270:FF:000001 Diguanylate cyclase domain protein - - 372 539 8.2E-49
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 252 363 2.5E-22
CDD cd00156 REC - - 253 353 7.64579E-24
CDD cd01949 GGDEF IPR000160 GGDEF domain 379 534 8.52015E-59
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 379 533 3.6E-41
Gene3D G3DSA:3.40.50.2300 - - - 243 375 9.8E-28
SMART SM00267 duf1_3 IPR000160 GGDEF domain 366 537 4.1E-54
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 246 378 3.13E-30
Coils Coil Coil - - 48 68 -
FunFam G3DSA:3.40.50.2300:FF:000346 Diguanylate cyclase response regulator - - 247 375 1.1E-62
NCBIfam TIGR00254 JCVI: diguanylate cyclase (GGDEF) domain IPR000160 GGDEF domain 374 536 8.3E-46
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 138 243 2.42E-5

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.