Pseudomonas fluorescens EGD-AQ6, O204_RS147515
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens EGD-AQ6 contig17, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAAATACACCGCCACCGTCAGCTACCTGCAGCCGTTCGCCCTGTGGGGCGAGTCGTTCAGTTTCTCCAGCCTCGCCACCGGCCAACGCAGTGAAGACATT CTGTTCAGCCCGCAGCGCATGAGCCTAGGTGGTTCTGCCTCGGTGCGTGGTTTCAAGGATCAGCAGTTGATCGGCGATAGCGGCGGCTACTGGCGCAACG AAGTGCGCTGGGCCCGTGCGGTGACCGTCGACTGGCTGCGCCCGGCTTTTGCTGAATACGGCGCCAGCGTCGGCTATGACCAAGGCGTGATCAGCAATGA TCGCTATAACGACCGTGTGCACGGCCGGGTTTCGAGCAACTCCCTGGAGCTGTTCGCCCGTGGCAAGAACCTGAGCACCAGTGTGACCTTTGCGCATTCT TTGGAACGCCCGGCAGTGATGAGCGAGCGCGAAGCGCCGATCTACTTCCGTATGGATTTCTTCCTGTAATTAAACGCCCCGCAGCAACGAGAATCTGAAA
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| DNA Sequence for Gene |
>O204_RS147515
ATGGATGTTCGCCAATTTGCCTTTCTGGCCCGCCAACCTTCCGCGGCATTGATGCCGCGTAACTCGTTCCTCGGCCTGCCCAAGCGCGGGCTGGTGCTGA TACTGGCCAACGCGTTGTTCTGGCAGCCGCTGCTGGCCCGGGCCGACGGCATCGTGGTCAGTGCGCCGGGGACCACCGTTGGCGCGGCGGGTAATGGCGT GCCCGTGGTGAACATCGCGACGCCTAACGGCAGTGGCCTGTCCCACAACCAGTTCAAGGACTACAACGTGGGTCCCAACGGCGTGATCCTCAACAATGCC AACGGTGCGGTGACCAACACCCAGTTGGGCGGCTATATCGTCGGCAACCCCAACCTCAAGGGCGGCGCAGCCAGCGTCATCCTCAACGAAGTCAACGGCG GCAGCCCCAGCCAGCTGCGCGGCTACACCGAAGTGGCGGGGCAATCGGCCAAGGTCATCGTGGCCAACCCCTACGGCGTCACTTGCAGCGGCTGTGGTTT CATCAACACGCCAAACGTCACCCTGACCACTGGTAAACCGGTGCTCGACGCGAACGGCCAGTTGCAGCGCTACCAGGTTGATGGCGGCGCCGTGACCATC GATGGCCAGGGCTTGAACGCGAGCAACGTCGACCGCTTCGAAATCATCACCCGCTCGGCCAAGATCAACGCGCAGATCAACGCGCGCGAACTGACGGTGA TCGCCGGTCGCAATGACGTGGACGCGCGAACGCTGAACGCTACCCCACGCGCCGATGACGGCAGCACCAAGCCTGAGCTGGCCATTGATTCGTCGGCCTT GGGCGGTATGTATGCCGGCGCGATCAAGCTGGTGGGTACCGAAGCCGGTGTGGGCGTGAAACTCGACGGCACGCTCGCGGCCAGCGGCGGCGATATCCAG ATCGATGCCAATGGACGCCTGAGCATGGCGCAAACGCAGGCCACCGGTAACGTCAAAGTCACGGCGCAGAACGTCGACCTTACCGACAAGGTCTACGCCG CCGGCAACGTACAAGTGACCAGCGCCCAGGCACTGGTCAACCAGAAGAGTGTGGCCGCCGGCCAACGCATCGAAATCAAGGCGACCACGGTCACCAACCC AGGCATCATCGAAGCGGGTGTCGCGCCCGATAACAGTCGAAACACCACCGGCGACCTGGTCGTCGATGCGCAAACCGTCAACACCACTGGCAACTTGCTG GCCAGCCGAGCCCTGGCGATCACCGCCGCGCAAGCGCTGACCAACCAGGGCGCAATCATCCAGGCCAAGAACGTCAGCGTCAGCAGCGCCAAACTGACCA ACCAGGGCGCCACTGCACGTCTTTTCGGCGAGCAGGCCCTGACCGTCGACGCACCGGCCATTGTCAACCTCGGCGGTTTGATCCGCTTTGGTGACGGCCA GGCCGCCACGCTGACCAGTGCCTCCCTGGACAACCGCCAAGGCCGCATCGAAATGGCCGGCGGCAGCCTGGTGCTCGACAGCCGCGAGCTGAACAACAAC GGCGGGCAGGTCGTCGCCAACCAACTGACGGTCAACGCGGGCAACCTGAACAACCAGAACGGCGTGCTGCTGGCTGGCGTGACGACAGTCAACGCCACCA ACCTCGATAACAGCCTTAAAGGCTTGATCCAGGCCGACAATGGCGCGTTGAATCTCACCGTCGCCAACGCCTTCAACAACAACCAGGGTTTCGCCCAGGC CAGCACCGACCTCAGCCTCAACGCCGGCACCCTTAGCAGCAACGCCAATGGTGTGCTGAGCGCCAACACCGGCAAGCTCACTCTCGTGACTGCCCAACAG CTCAACAACGCTCAAGGCCGCTTGCAGGCCGGGCAGGGCAATGTCGAGCTGCACGCTGCAAACCTGGATAACCAGAGCGGCGTGATCGTCGGCAAGCAGC TGCTGCTCGACGTCAACGCAGGGGACATCGACAACCGCGCCGGCCGTGTGCTCGGCGACAAGCTCGACGTACGCGCCTCCGGCCTCGATAACCGCAACGC CGGCCTGCTGGCCGGTGGTGCCGAAGGCGTCAGCCTGCTGCTCAAAGGCCCGGGCCAGTTGCTCAATGCCCAAGGCCGCATCCAGAGCGAAGGCCTCTTG CAACTGCAAGGCGAGCGCCTGGACAACAGCGCCGGCATCCTGCTCGGCCAAACGGTCGACGTGACCGCCCAGCGCTTCACCAACAGCAACAAGGGCGCGC TGGTCAGCGATGGCGGCGACATCACCTTCAACGTCAGTGACCTGCTGACCAACGTCGATGGCGTGATCGACGCCGGCGAGCGCAACCTGCTGGTCAAGGC CCTCACCACCCTCAACAACGACGGCGGCACCCTGCGCGGCAAGCGTCTGGACATCGCCGCCCAGTATTTGAACAACGACAACGGCCAACTGCTGGCCGGC AACCTGGGCCTGGGCTACAGCGGCCAGAGTGTGACCAACCGCAAAGGCCTGATCCTCAGCGGCGGCGCGCACACCGAACTGGACACCGCAAGCCTGGATA ACCAGGGCGGCACTGTGCAAGGCGATACCTTGACCGTCACCGCCGACAAGGCCGACAACGGCAGCGGTGGCCTGATGGCGAGCTTGCTGGGCGACCTGCA ACTGACGGTCGAAGCCCTGACCAACCGTGGCGGCAAACTGTTCGGTAAAGAACAGGTCACCGTCAGCGGCGCGACCCTCGACAACAGCGCCAGCGGCCAG ATCAGCGGCAATGTGCTCAACCTGACCTCACGCGCTACCCTCACCAACCAGGGGGGCCTGATCGAAGCCAACCAAGGCCTGACCCTCGTCGGCGGCAACC TCGACAACAGTGCCGGCGGCCAAGTGCGTGCATTGGGCGGCGCCAACAGCAGCCTCGACTTCAGCGACCAGCTAAACAACCAGAACGGTACGTTGGAGTT CGCCAGCCAGGCCTTGCGCCTCGACACCGCGAACCTCAACAACCAGGGCGGTATGTTGCAGCACGCCGGCAGTGGCCTGTTCCATATCAACACTGCCGGC CTTACTGGCAGCCAAGGCAATATCCAGGGCATGGGCACCGCTGACTGGGCATTCGGTAAAGTCGTCAGCCTCGGCCGTGTACAACTCAACGAAGTCCTTA CCTACAAAAGCGCCCAGGGCCTGACCCTCAAGGCCGGCGACCGCATGGCCAGTGGCAAGGGGTTGATCCTCGACGTAGCCAGCCTCGACAACGGCGGCGA ATTGCTCAGCGATGGTGATTTGAGCATCACCACCACCGGCGACATCACCAACAGTGGTCGTGTGTCGGCCTTGCAAAAACTCAGCGTGACGGCGAATAAC CTCAGCCAGAACGGCGGACGCCTGGCGGGCAGCCACACTCAACTGAACCTGGGCGGTACGCTGGATAACCTTGGTTTTCTTACCGCACGTCAGCAACTGG ACATTGCGGCGACCCAGATCAATAACCGAGGAACCCTGGGCGCCCAGGGTGCCGTGAACCTGCTGGCGTCGAACGGTTTCACCAATGCTGCCGATTCGCT GCTGTTCAGTGGCGGCAATATGATTTTGCGTGGCAACAACTTCAGCAATACCTACGGTGACGTGTACAGCCAGGGCAACCTCAGCTTTGCCGCCATTGAT GGCGGGCCTGCCGCCGGTTTCAGCAACCTTTCCGGCACCGTCGAAAGTACCGGCAATATCAGCATCAATGCGGCGTTTGTGGAAAACGCCAAGGCCGAAT TCGAACTCGGGCAAACCCTGCAGGGTGGGCGTGTGGAGTGGTTATGTGGCCAGCATTGCGACGGGCATGATTCGTTCAAACGTGGCCAAATCAACATCTA CCAGACCTACCTCGAATCAGCGGTCAAGGACTCGGCACCCGCTCGCCTTGTAGCAGGCAAGGATCTGCTGATCCAGGCGAATATGGTGCAGAACCGCTAC AGCCTGATGGCCGCCAATGGCAACCTGGGCATCGTCGCCAATGACCTGCTCAACCAGGGCGCGGGTACGCGCACCGGTCAAAACACCATCGTCATCGGTA CGCCGTACAGGATCGACCTTGGCTATTGGGACCAGATGGAGTACGTCGATATCCCGGCGTTCAACGCCGCGGTCGCGGCCGGTAACTTTGACCTGGCGCG TTTCGAAGCACTCAAGGCGCGTTCTTCGGATGCCCGTTTCGCTGAGGTCAGTAACGTCACCACCTGGACCGACAACACCGGCCCAGGCTATGGCGCCACC CTGCAAGCCGGCGGCACCGTCAACCTCAACGTCGCCCGCACCCTGCAAAACGGCACGTTGCACGAAAACACCCTGGCGCAATTGACCGGCACCTTGGGCG ATGACCAGACCGGCATCCCTGTCGGTGGCATCAACATCAACCTGAGCAAGCACGCCAACGACGTCAGCGCCCAGTCGCCCGGCACCGTGCTGCCAGTGGC CGGTGTCGCACCCGGCGGCGGATTCGTGCCTGTGGATTACACGGGCACGCCGTTCGCGCCGGTCGACCCCACCACCGCGCCCAACTTCCAGTTGCCCAAG GGCGAATACGGTCTGTTCGTTAAAAACGCCGACCCTACCAGCCATTACTTGATCGAAACCAACCCCGAGTTCACCTCGTTAGAGGGCTTCTTCAGCTCCG ACTACATGCTCGGCAAACTCGGCTACAGCGCCGACAACGCCTGGCGTCGCCTCGGTGACGGCCAGTACGAAACCCGCCTGATCCGCGACGCGGTGCTCGC CCAGACCGGCCAACGCTTCCTCGCTGGCGGCCTGTACAGCGACGCCGACCAATTCCGCTACCTGATGGACAACGCCCTCGCGAGCAAAGACGCCCTGCGT CTGAGTGTCGGTGTCACGCTGACCAGCCAGCAGGTCGGCGCCTTGACCCACGACATTGTGTGGATGGAAAACCGCGTAGTCGACGGCCAGACAGTCCTCG TCCCGGTGCTGTACCTGGCCCAGGCCGAATCGCGCAACGTACGCGGCAACAGCCTGATTCAGGGGCGCGACCTGAACTTGGTCACCGGCGGCGACCTGGT CAACGTCGGCACCCTGCGCGCCAGCAACAATCTCTCTGCCGCCAGCACGGGCGGTAGCATTTACACCGGCGGCCTGATCGAAGCCGGCAACAACCTGAGC CTGCTGGCCGACGACAGCATCCGCAACGCCATGGCCGGCGAAATTCGCGGCAAGCAAGTCAGCCTCGCCACGCTCAAAGGCGACATCACCAACGACACCA CCGCCATCCAGGTGCGTGACGGCGCCGGCATGCGCACCCTCAGGGACAGCGGCGCCGGCACCATCGTCGCCCGCGAAAACCTGGCCATGGACGCCCACCG CGACCTCACCAACCGCGGCGCCCTGGTCGCCGGTAACGACGCCAGCCTCGTCGCCGGCCGCGACCTCAACCTTGTTGCCGCCAGCGATACCAGCGTCAAG CATGAATTCAGCGACGGCGGCCACAAATCCAGCATCACCACCGACGTCAAAAACCTTGCCGCCACCGTCACGGCGGGGGGCAACCTGAACATGAAGGCTG GGCAGGACGTCAATATCATCGGCAGCAACGCTACCGCTGGCAAAGACATGAACGTGCAGGCTGTACGCGATTTCAACGTTGTCTCCGTTGGTGATACGCA CAACGTCGAGGGCCGGGAAAAGGATGGCAAGAAACGCATCAAGACCTCGGACGAGCAAACCACGCAAGTCGCGAGTGTGTTGACAGCTGGCAGGGACTTT ACCAGCCAGGCCGGGCGTGACACGACGCTCGTCGCCAGCAAGATCAGTGCGGGGAATGAGGCGTACCTGTACAGCGATCGGCGCTTGGGCCTGCTGGCGG GGCAAAACAGCGCCTACACACTCTATGACATGAAGAAAAATAGTGGCTGGGGGGGTAAACAAACCCGCCGCGATGAAGTGACCCGCGTGACGCACGTCGG CAGTGAAATCAATGCAGGTGGCGATATCGGCTTGATCAGTGGCAGTGACCAACTCTACCAGCGCGCCAAATTGACGAGTGGCAAAGACGTCAACATCCTC AGTGGTGGATCGGTGACGTTCGAGGCGGTCAAAGACCTGCATCAAGAAAGCCATACCAAGAGCAAAAGCGATTTGGCCTGGACGAGCTCATCAGGGCGCG GCAACACCGACGAAACCCTTCGCCAGACTCAAATCGTTGCACAGGGCAAGTTCGCGATCCAGGCCGTCGATGGCTTGAAGGTTGATATCAACCATATCGA CCAGAAAACGGTTGCCCAGACCATTGATGTGATGGTCAAGGCGGACCCGCAGTTGGCGTGGTTGAAGGATGCCGAGAAACGCGGCGATGTCGACTGGCGC CAGGTTCAAGAGGTGCATGACTCCTTTAAGTACAGCCATTCGAGTCTGGGCCAGGGCGCGATGCTGGCCATCATTATTGTCGTGACGGCGCTGACCGCGG GAGCTGCAAGCGGCCCACTGGGTGCTGCGGCCGGAGCCAGTGCCGGGTCGGGTACGGCAATGGCGGCGGCGGGCAGTTCTGCGATGGTGACGGCGGGCAC AGCGTCAGGTGTGGCGGCGGCAGGCTGGGGTAACGTGATGATTACAACGGCACTCTCTTCAATGGCAGGCACGGCGGCTGCAAGCACGATCAATAACAAG GGTAATCTTGGAAAGGTGTTTGACGATGTGACCAGCGCAGATGCGCTGAAAGGCTACGCCACGGGCGCGGCGATTGCCGGTTTTGGTGCGGCCTTCACCA ACGGTTGGGGGCGTGAATTAACATCGGACGGTAACTACAAGACGGTGAGTTATGCCGAGCGGGTCAAGGCTTATACCGCGAATACCGCACTGAAAGGCGT GTTGAGTGGCAAAGATAAAAAGTCTTGGCTGACCATCGCGGGCACGGGGGCGCTGACCGAAGTGTATGAATACTCTGCTGGCCGTGGGCCGGATGTAAGA CCAGGCGTGGACAGAGACGGAGGGGCAAAATATGACCCGCTCAGCGGCGGCTATGTCCCACAAGTTGATGAGGGTGGCGTGATAAGAGAGGGGAAAAATA TTGGTCTTAACCGTACAACAGACTGTGGTAGCTTTTATTCTGTTTGTCACGGTACTCCAGTCAGCAATATATTAAATCAAGTTCCAGGGTTTAATGGGTT TGCTACATTGCACGATGGCTGGATGATTAATTTGGAAGCCTACAAAAAAGCGGATATGTCGCTTTTTGAAAATTTGGGCAGCATGCCGCCTGCTCTGATT GTGAATTATGGAGCCCTGTACGATAAGTACCGCCCAGCCATTGAATCGGAGAAAAAGCGTGAAAATTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TAAATGGCTTTTAATCGTATTATTGTCGGCCTTGGCGGGGTGCGCACCTTCCCATTCCAATTGGGAAAATGGAATGAATCTCTGGGTAGGTACTCATTTT GATTCCCATCTTTACAAGGACTGCACGCGAGGCTGTGGCGACTCATATTGGTCGCCTGTAAATGAGAACAAGACGTTTGATAAGGTTGTTGATGAAAGCG GAGGCAAACGCTATTACATAACTTGGATTAGAGATTGTCGATATTCGGTTTTTGTCGCTGCGGATCGGATAATAAAGTCATGGAGATACGAAACGTCTAA CGTAAAAGGATGTTATGTTTTTTAACGGCTGTCTTAAGCGGAGAGAAAGCATACAGGTTTATTGAGTGATTAATGGCCGGTCAGCGCCAAGCCTAAATAA ATCCGTCCCCATTTTCTATATAGGCGGTTCGTCAGAAATTCTTGGAAGCAGTCTGCGCCTACGGTTCTGAAGTTATTAGCGGCGTTATAACCACTGGGTG
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| Amino Acid Sequence |
>filamentous hemagglutinin
MDVRQFAFLARQPSAALMPRNSFLGLPKRGLVLILANALFWQPLLARADGIVVSAPGTTVGAAGNGVPVVNIATPNGSGLSHNQFKDYNVGPNGVILNNA NGAVTNTQLGGYIVGNPNLKGGAASVILNEVNGGSPSQLRGYTEVAGQSAKVIVANPYGVTCSGCGFINTPNVTLTTGKPVLDANGQLQRYQVDGGAVTI DGQGLNASNVDRFEIITRSAKINAQINARELTVIAGRNDVDARTLNATPRADDGSTKPELAIDSSALGGMYAGAIKLVGTEAGVGVKLDGTLAASGGDIQ IDANGRLSMAQTQATGNVKVTAQNVDLTDKVYAAGNVQVTSAQALVNQKSVAAGQRIEIKATTVTNPGIIEAGVAPDNSRNTTGDLVVDAQTVNTTGNLL ASRALAITAAQALTNQGAIIQAKNVSVSSAKLTNQGATARLFGEQALTVDAPAIVNLGGLIRFGDGQAATLTSASLDNRQGRIEMAGGSLVLDSRELNNN GGQVVANQLTVNAGNLNNQNGVLLAGVTTVNATNLDNSLKGLIQADNGALNLTVANAFNNNQGFAQASTDLSLNAGTLSSNANGVLSANTGKLTLVTAQQ LNNAQGRLQAGQGNVELHAANLDNQSGVIVGKQLLLDVNAGDIDNRAGRVLGDKLDVRASGLDNRNAGLLAGGAEGVSLLLKGPGQLLNAQGRIQSEGLL QLQGERLDNSAGILLGQTVDVTAQRFTNSNKGALVSDGGDITFNVSDLLTNVDGVIDAGERNLLVKALTTLNNDGGTLRGKRLDIAAQYLNNDNGQLLAG NLGLGYSGQSVTNRKGLILSGGAHTELDTASLDNQGGTVQGDTLTVTADKADNGSGGLMASLLGDLQLTVEALTNRGGKLFGKEQVTVSGATLDNSASGQ ISGNVLNLTSRATLTNQGGLIEANQGLTLVGGNLDNSAGGQVRALGGANSSLDFSDQLNNQNGTLEFASQALRLDTANLNNQGGMLQHAGSGLFHINTAG LTGSQGNIQGMGTADWAFGKVVSLGRVQLNEVLTYKSAQGLTLKAGDRMASGKGLILDVASLDNGGELLSDGDLSITTTGDITNSGRVSALQKLSVTANN LSQNGGRLAGSHTQLNLGGTLDNLGFLTARQQLDIAATQINNRGTLGAQGAVNLLASNGFTNAADSLLFSGGNMILRGNNFSNTYGDVYSQGNLSFAAID GGPAAGFSNLSGTVESTGNISINAAFVENAKAEFELGQTLQGGRVEWLCGQHCDGHDSFKRGQINIYQTYLESAVKDSAPARLVAGKDLLIQANMVQNRY SLMAANGNLGIVANDLLNQGAGTRTGQNTIVIGTPYRIDLGYWDQMEYVDIPAFNAAVAAGNFDLARFEALKARSSDARFAEVSNVTTWTDNTGPGYGAT LQAGGTVNLNVARTLQNGTLHENTLAQLTGTLGDDQTGIPVGGININLSKHANDVSAQSPGTVLPVAGVAPGGGFVPVDYTGTPFAPVDPTTAPNFQLPK GEYGLFVKNADPTSHYLIETNPEFTSLEGFFSSDYMLGKLGYSADNAWRRLGDGQYETRLIRDAVLAQTGQRFLAGGLYSDADQFRYLMDNALASKDALR LSVGVTLTSQQVGALTHDIVWMENRVVDGQTVLVPVLYLAQAESRNVRGNSLIQGRDLNLVTGGDLVNVGTLRASNNLSAASTGGSIYTGGLIEAGNNLS LLADDSIRNAMAGEIRGKQVSLATLKGDITNDTTAIQVRDGAGMRTLRDSGAGTIVARENLAMDAHRDLTNRGALVAGNDASLVAGRDLNLVAASDTSVK HEFSDGGHKSSITTDVKNLAATVTAGGNLNMKAGQDVNIIGSNATAGKDMNVQAVRDFNVVSVGDTHNVEGREKDGKKRIKTSDEQTTQVASVLTAGRDF TSQAGRDTTLVASKISAGNEAYLYSDRRLGLLAGQNSAYTLYDMKKNSGWGGKQTRRDEVTRVTHVGSEINAGGDIGLISGSDQLYQRAKLTSGKDVNIL SGGSVTFEAVKDLHQESHTKSKSDLAWTSSSGRGNTDETLRQTQIVAQGKFAIQAVDGLKVDINHIDQKTVAQTIDVMVKADPQLAWLKDAEKRGDVDWR QVQEVHDSFKYSHSSLGQGAMLAIIIVVTALTAGAASGPLGAAAGASAGSGTAMAAAGSSAMVTAGTASGVAAAGWGNVMITTALSSMAGTAAASTINNK GNLGKVFDDVTSADALKGYATGAAIAGFGAAFTNGWGRELTSDGNYKTVSYAERVKAYTANTALKGVLSGKDKKSWLTIAGTGALTEVYEYSAGRGPDVR PGVDRDGGAKYDPLSGGYVPQVDEGGVIREGKNIGLNRTTDCGSFYSVCHGTPVSNILNQVPGFNGFATLHDGWMINLEAYKKADMSLFENLGSMPPALI VNYGALYDKYRPAIESEKKREN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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