Pseudomonas fluorescens EGD-AQ6, O204_RS149265
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens EGD-AQ6 contig15, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCCCGATACGGTCGATTGTAGCCACGGGCCAGCCCTCAAACACAAGCCGGGAAATCCATTCGGTGATCGCGTTTTTTTGTGATAGGGTTCGCGCCCTTCG AAAATGGGCAGGTTGTTTTAAGCCCGAAACAATTAATGACAAACGGCGTAATCCAGCAGCAATGCGGCCTACACGCCCATTCAACCTTTCTTACACATTT TACCCACAGCGTTATCCACAGGTTACTGCGTTGCTAACCCCTCAAAAACGCATTATCTTGTACCTCGGCACTGAATAAGACCCTACATGTGGGGTTTTTC AAGAAAGCGCCCAACCACACAAGTGGCAAGAAATTCAAGCGTTTTATTGCTACCGCAGCATGGAACCAACCGATTTTCAGTAGACCAAACCGCTCACGCG GATGGCAGCTGTTTCCCATCCCCGATATGGAAAACGGTACGGGTGTTGCAGGAAGAGCCTGGCACTCGCAATCAAATATAGAACGTGGAGACAACCCCCC
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| DNA Sequence for Gene |
>O204_RS149265
ATGCAAACCGACACAACTCGCGAGAACCCGCAAGGCTCCGTGCAGCAGGCCGCCGATTCGAACCTGGATCTGTCAGCCACCGCACCCGGCCAATTGCGTG TGATCAAGCGTAACGGCACTGTCGTCCCTTACACCGATGACAAAATCACCGTCGCCATCACCAAAGCGTTTCTTGCAGTTGAGGGCGGCACCGCTGCTGC CTCGTCGCGCATCCACGACACCGTTGCCCGCCTGACCGAACAAGTCACCGCGACCTTCAAGCGTCGCATGCCTTCGGGCGGCACCATCCACATCGAAGAA ATCCAGGACCAGGTCGAACTGGCCCTGATGCGTGCCGGCGAGCAGAAAGTTGCCCGCGACTACGTGATCTACCGTGATGCCCGCTCCAAGGAGCGCGCTG TACGTGCCCCGGCTGAAGAAGCCGCCGTACAGGCTCACCCATCGATCCGCATCACCCTGGCCGACGGCACTTTTGCGCCGCTGGACCTGGGTCGCCTGAA CACCATCATCACCGAGGCCTGCGAAGGCCTGGAAGAAGTCGACGGTGACCTGATCCAGCGCGAAACCCTGAAGAACCTGTACGACGGCGTGGCCCTGACC GACGTCAACACCGCCCTGGTGATGACCGCCCGTACCCTGGTTGAACGCGAGCCGAACTACTCGTTCGTGACCGCGCGCCTGCTGATGGACACCCTGCGTG CCGAAGGCCTGGGCTTCCTGAAAGTCGCCGACAGCGCCACCCACCACGAAATGGCCGACCTGTACGCCAAGGCCCTGCCTGCCTACATCGCCAAGGGTAT CGAATTCGAATTGCTGAACCCGATCCTGGCCACCTTCGACCTGGAAAAACTCGGCAAGGCGATCAACCACGAGCGTGACCAGCAGTTCACCTACCTGGGC CTGCAGACCCTGTACGACCGTTACTTCATCCACAAGGACGGTATCCGCTTCGAACTGCCGCAAGTGTTCTTCATGCGCGTGGCCATGGGCCTGGCGATTG AAGAGAAGCAGAAAGAAGACCGTGCCATCGAGTTCTACAACTTGTTGTCGTCCTTCGACTACATGTCGTCGACCCCAACCCTGTTCAACGCCGGCACCCT GCGTCCACAGCTGTCCAGCTGCTACCTGACCACCGTGCCGGATGACCTGTCGGGCATCTACCACGCGATCCACGACAACGCCATGTTGTCCAAATTCGCC GGCGGCCTGGGCAACGACTGGACCCCGGTGCGTGCACTGGGTTCGTACATCAAGGGCACCAACGGCAAGTCCCAGGGCGTTGTGCCCTTCCTGAAAGTCG TGAACGACACCGCCGTTGCGGTCAACCAGGGCGGCAAGCGCAAAGGCGCTGTATGTGCCTACCTGGAAACCTGGCACATGGACATCGAAGAGTTCATCGA GCTGCGCAAGAACACCGGTGATGATCGTCGTCGCACCCACGACATGAACACCGCCAACTGGATCCCTGACCTGTTCATGAAGCGTGTCTTCGATGACGGC AAATGGACCCTGTTCTCGCCATCCGAAGTCCCGGACCTGCACGACCTGACCGGTAAAGCCTTCGAAGAGCGCTACGAGTACTACGAAGCCCTCACCGAAT ACCCAGGCAAGGTCAAGCTGTTCAAGACCATCCAGGCCAAAGACCTGTGGCGCAAAATGCTGTCCATGCTGTTTGAAACCGGCCACCCATGGCTGACCTT CAAAGACCCGTGCAACCTGCGCAGCCCGCAGCAGCACGTGGGCGTGGTCCACAGTTCGAATCTGTGCACCGAGATCACCTTGAACACCAACAAGGACGAG ATCGCCGTTTGCAACCTGGGCTCGATCAACCTGCCGAACCACATCGTCAACGGCAAGCTGGACACCGCCAAGCTGGAGCGCACCGTCAACACCGCAGTAC GCATGCTCGATAACGTGATCGACATCAACTACTACTCGGTGCCACAGGCGCAGAACTCCAACTTCAAGCACCGTCCAGTGGGCCTGGGCATCATGGGCTT CCAGGACGCGCTGTACCTGCAGCACATTCCTTACGGTTCGGATGCTGCGGTCGAGTTCGCCGACAAGTCCATGGAAGCGGTCAGCTACTACGCGATCCAG GCTTCCTGCGACCTGGCCGACGAGCGCGGCGCCTACGAGACGTTCCAGGGTTCGCTGTGGTCCAAGGGCATCCTGCCGCTGGATTCGCAACAGATCCTGA TCGAAGCCCGTGGCCAGAAGTACATCGACGTTGATCTGAACGAAACCCTGGACTGGGCGCCGGTACGTGCCCGCGTGCAGAAAGGTATTCGCAACTCCAA CATCATGGCCATCGCACCGACCGCCACCATCGCCAACATCACCGGCGTATCGCAGTCGATCGAACCGACCTACCAGAACCTGTATGTGAAATCGAACCTG TCGGGCGAATTCACCGTGATCAACCCGTACCTGGTTCGCGACCTGAAAGCCCGCGGCCTGTGGGACTCGGTCATGATCAACGACCTGAAGTACTACGACG GTTCCGTGCAGCAGATCGAGCGCATCCCGCAAGAACTCAAAGAGCTCTACGCGACGGCCTTCGAAGTGGACACCAAGTGGATCGTTGACGCCGCCAGCCG TCGCCAGAAGTGGATCGACCAGGCCCAGTCCCTGAACCTCTACATCGCCGGCGCTTCGGGCAAGAAGCTGGACGTGACCTACCGCATGGCGTGGTACCGT GGCCTGAAAACCACTTACTACCTCCGCGCCCTGGCCGCGACCAGCACCGAGAAGTCGACCATCAACACCGGTAAGCTGAACGCTGTTTCCAGCGGTGGCA ACCACGGTGATGATTCGGTGCTTGCAGCGCCAGCCGGCCCGGCGCCAGTGCCAAAGGCCTGCGCGATTGACGAGCCGGATTGCGAAGCTTGCCAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCTGAGGCAGTTCCGGGTTTAATCACCCGGAACTGAAAAACCCCCGATATACCCCGGATTCACTGGGGTTTATCGGGGGTTTTTATTGGCCAGGACGAAA GACCGGAACCTCAGAACAACACGGTCGCCATACCCGACTGGGGCACCCCACCGCGTCGACCCCACAACTCAATTCGACCATCGATCACCGCCATCGAATG GCCTCCGTACTCCACCGTCCCCACCTTGCTGCTTCTCAAATCAGAGTCCGTCGCCGGCCTGTAGTGCCCCTTGAGACCCAAGCGGTTTAGCCCCTCGCGC GAGCCCTCACCATCGTTGAGGCTGTTCATTGCAGCCTGGAAGCTTCGCCCCGCCGTGCCATCGTTGTTTTCCATCTGTGCCCGCTTCGCGCTCGCTGCAT ACATGAAGTTGGCGTCCGTGATCATCTGCGGATCATCTCCCTTGAAACGAGCTTGAGTGGCAGCCTGCCTCAATTCATCTTTAGTAAAAGAAACCTTGAC
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| Amino Acid Sequence |
>ribonucleotide-diphosphate reductase subunit alpha
MQTDTTRENPQGSVQQAADSNLDLSATAPGQLRVIKRNGTVVPYTDDKITVAITKAFLAVEGGTAAASSRIHDTVARLTEQVTATFKRRMPSGGTIHIEE IQDQVELALMRAGEQKVARDYVIYRDARSKERAVRAPAEEAAVQAHPSIRITLADGTFAPLDLGRLNTIITEACEGLEEVDGDLIQRETLKNLYDGVALT DVNTALVMTARTLVEREPNYSFVTARLLMDTLRAEGLGFLKVADSATHHEMADLYAKALPAYIAKGIEFELLNPILATFDLEKLGKAINHERDQQFTYLG LQTLYDRYFIHKDGIRFELPQVFFMRVAMGLAIEEKQKEDRAIEFYNLLSSFDYMSSTPTLFNAGTLRPQLSSCYLTTVPDDLSGIYHAIHDNAMLSKFA GGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGGKRKGAVCAYLETWHMDIEEFIELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDG KWTLFSPSEVPDLHDLTGKAFEERYEYYEALTEYPGKVKLFKTIQAKDLWRKMLSMLFETGHPWLTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDE IAVCNLGSINLPNHIVNGKLDTAKLERTVNTAVRMLDNVIDINYYSVPQAQNSNFKHRPVGLGIMGFQDALYLQHIPYGSDAAVEFADKSMEAVSYYAIQ ASCDLADERGAYETFQGSLWSKGILPLDSQQILIEARGQKYIDVDLNETLDWAPVRARVQKGIRNSNIMAIAPTATIANITGVSQSIEPTYQNLYVKSNL SGEFTVINPYLVRDLKARGLWDSVMINDLKYYDGSVQQIERIPQELKELYATAFEVDTKWIVDAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWYR GLKTTYYLRALAATSTEKSTINTGKLNAVSSGGNHGDDSVLAAPAGPAPVPKACAIDEPDCEACQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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