Pseudomonas fluorescens EGD-AQ6, O204_RS149930
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens EGD-AQ6 contig14, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CATCCCAGTTCACCGCCCAGCCATAGTCGGCGGGGTAGATGTCGCTGGTCAGGCGTTCTTCATAGCCATGCAACTGATCGGGGCCGCAGAAGTGCATCTT GCCCGACAGCGCTGTGCGATACCCGAGGCGGCGCAGGTAGTGGGCATAGGTCGGCACATCGGCGGGGAAATCGGCGGCATTGTCGTAGGCGCCGATCTTG CTCGGCAGTTGGCCAGTGACCAGGGTGAAGCGCGACGGCGCACACAACGGGCTGTTGCAATAGGCGGCATCGAACACCACGCCTTGCTCGGCGAGGCGAC TCAGGTTGGGCAATTTGATAGGCGAAGAACCGTAGAACGGAAGCAACGGTGCGGCCATTTGATCGGCCATGATGAAAAGAATGTTCTTGCGCTTCATGAT CTATCGGCATTCCATAGGCGGTGTTTATGCGAATGAGCATGCAGCCCATGAAAAGTGGGGTAAAGCCCATGAGAAGCAATGTCTAGGATAAGCACAGCTT
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| DNA Sequence for Gene |
>O204_RS149930
ATGTATGAAGCCCTCGGTGACCTGTCCCTCGATTTGCTGCGTGCCTTCGAAGCCGCCGCACGTCATCGCAGCTTTACCGCCGCCGCGATGGAATTGGGCA CCACCCAACCGGCAATCAGCCAGCAGATCAAGCGCCTGGAAGAACAGTTGGCGATCCGCCTGTTTGACCGCATCTACCGAGGCATCGAATTGACCGACGC CGGCGCCCTGCTATTCGAGCACGTGCAAGGCGGGTTGCAGGGGATCAACCAGGGCCTGAGCCTCATCACCCAGCAGGACCAGCATGAAGTGCTGCAAGTC GCCACCGACTTCGCCTTCGCCGCCTATTGGCTGATGCCGCGCCTGCATCGCTTTCATAAGGCCAACCCGCAGGTCGATGTAAGCCTGGTGACCAGCGAGC GCAACCACGCCACCCTGCGTAGCGATATTGACGTGGCGGTGTTGTTTGGTGACGGCCGTTTCAAGCAGGGCGACAGCCTGTGGCTGTTCAACGAGGAGGT GTTCCCGGTGTGCAGTCCACAATGGCTCAAGGACCAGACCACGCCGCTGACTGTGCAAAATTTGCACGATTTCCCACTGTTGCACCTGCGCCAGGAAAAC AACAGCCAGTGGTTCGACTGGAGCGGCGTGTTTCGCGAACTGGGCATCGCCAGTGCGCCGACGCCGGGCCAACTGCGTTTTGACAACTACACCCTGCTGA TCCAAGCCGCGATTGCCGGCCAGGGCGTGGCCATCGGCTGGCGCCACTTGGTGGATAACCTGCTGGAGCAGGGTTGGTTGTGCCGACCGCTGAGCGACAC CGTGATCTCGCGCTTCGGCTATTACGTGGTGCAACCCCAGCGCAAACGCAGGGGGCAGTTGGTCGAGCGCTTCGTCGAATGGTTGGTGGCGGAACAAGCC AGCAGCGCACAGTCGCTGACCGGGCTGGCCCTACCGTCCATTGCGGTCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CATCTGGCGCATAGGGGATCCGGAGTCCGTCATGCAACGTATCAAGGGCTATCACGCCCATATCTACTTCGACGCGAGCACTATCGACCAAGCGCGCAGC CTGTGTGAAGACGCTGCCAAACTCTTCCCGCTGCGCATGGGCCGTGTGCACGAACGGCCGGTGGGGCCGCACCCGGATTGGAGCTGCCAGCTGGCGTTCG ATCCTGAATACATCGGTGTCGTGTTGCCGTGGTTGGTGATTCATCGCAACGGGCTGGTGGTTTTTTTGCACCCCGAAACCGGTGATGACCTAAAGGACCA CACTGACTATGCCGTCTGGATGGGGGCGATGCGGGAGCTGAACCTGTCAGCCTTTTCTTAAATTCAATCCCTAAATATGGGATTGATATTTATATATTGA GACTTCCGCTCGCGTAGGTTTATATTCGCTGCATCCGCTCAGAACTCAGGTGAAGCGATGCAGGCGCAATTGATCGCGCTCGATTGGGGGACCAGCTCCC
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| Amino Acid Sequence |
>LysR family transcriptional regulator
MYEALGDLSLDLLRAFEAAARHRSFTAAAMELGTTQPAISQQIKRLEEQLAIRLFDRIYRGIELTDAGALLFEHVQGGLQGINQGLSLITQQDQHEVLQV ATDFAFAAYWLMPRLHRFHKANPQVDVSLVTSERNHATLRSDIDVAVLFGDGRFKQGDSLWLFNEEVFPVCSPQWLKDQTTPLTVQNLHDFPLLHLRQEN NSQWFDWSGVFRELGIASAPTPGQLRFDNYTLLIQAAIAGQGVAIGWRHLVDNLLEQGWLCRPLSDTVISRFGYYVVQPQRKRRGQLVERFVEWLVAEQA SSAQSLTGLALPSIAV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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