Pseudomonas fluorescens EGD-AQ6, O204_RS150200
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens EGD-AQ6 contig14, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGGTGACGCTGCCAGTGCAGCTTCAGCGGGATAGGTACTTTTGCGTATCCGTAGCCCGGCAGGTCGACCAGACGCCGATCATCGTCTAGCTTGAAGAAAT TGAGGAGCTGCGTGCGGCCTGGGGTTTTTGAGGTGCGTGCCAGGCTGGCGTGGGTCAGGGTGTTCAGCGCGCTGGATTTGCCAGCGTTGGAACGACCGGC AAAGGCGACTTCAAAGCCTTCGTCATCGGGGCATTGGTCAACTTTGGCGGCGCTGAGCATGAACGTGGACTGTTGGCACAGACCGAGGATGGGATTCTTG AGTTGCATGAGATTTCCGATGTGGGCGGTGCCGAAAAAGGGTGCGGCAAGCGGTGTCGTTTCCGTTTCAGTAGCGCCAGTATATAATGCCGCAGATTTTG TGTGTGCTTTGTCCCAGCGAAGGATGAAGTTCACGGGAGCGATAGACCTTTATTGCGCATTAGAACGCAAAACGCTCTCAAACCCTGAAATGGTCGACGT
|
|
| DNA Sequence for Gene |
>O204_RS150200
ATGACCAAGTGGTTGCTCGCTATCGGTGTCCTGGTCCCGCTTTACAGCGCTCAGGCTACACAGGATCCGGAAGCGGTGTACAACCGAGTTTGCGTGGCTT GCCATGCCGGCCAGTTGCCCAGCGCCCCCAGACGGGGTGACCAGGCAGCCTGGGCGCCAAGACTGGCGCAGGGCATGGACACGCTGGTGCAACACGTGAC CCAGGGTTTCAAGGCAATGCCGCCGCGTGGTTTGTGCATGGACTGCAGTACTGAGGATTACCAGGCCATCATTGAATTGATGGTGAGTAAACCCGGTAGA TAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CTCTTAAACCCCTTAGCCGTAGTTGGATTAGCTGATGAACAAACTGATCGTGAGTCTGCTGTTGACCTTGGGCATCACAGGCGCTGCCGTCGCTGCAGAG GGCCCCCTCAAAGGTGATGCCACTGCCGGTCAAGCGAAAGCCGCCGTATGTGGTGCTTGCCATGGACCGGATGGTAACAGCCCGGCGCCGAACTTCCCCA AACTGGCCGGCCAGGGTGAGCGTTACCTGACCAAGCAACTGCACGACATCAAGGATGGCAAGCGTACGGTCCTGGAAATGACCGGCTTGCTGACCAACCT CAGCGATCAGGACCTGGCAGACCTCGCGGCTTATTTTGCCAGCCAGAAAGGCAGTGTGGGAGCTGCTGATCCGAAACTGGTGGCCCGTGGTGAGAAACTG TTCCGCGGCGGTGACCTGGAGAAAGGCCTGCCTGCCTGCACCGGTTGCCACTCGCCCAATGGCGCGGGCATAGCGGCCGCCGGCTTCCCGCACCTGAGCG
|
|
| Amino Acid Sequence |
>cytochrome
MTKWLLAIGVLVPLYSAQATQDPEAVYNRVCVACHAGQLPSAPRRGDQAAWAPRLAQGMDTLVQHVTQGFKAMPPRGLCMDCSTEDYQAIIELMVSKPGR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|