Pseudomonas aeruginosa PA7, PSPA7_5478 (carA)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0071230	cellular response to amino acid stimulus	ISS Inferred from Sequence or Structural Similarity Term mapped from: PseudoCAP:PA4758	ECO:0000249 sequence similarity evidence used in automatic assertion	8169201
Biological Process	GO:0006541	glutamine metabolic process	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR01368	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006207	'de novo' pyrimidine nucleobase biosynthetic process	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR01368	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0004088	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR01368	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Amino acid biosynthesis and metabolism Other PA7 genes in this class Nucleotide biosynthesis and metabolism Other PA7 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pap00240	Pyrimidine metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pap00250	Alanine, aspartate and glutamate metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pap01100	Metabolic pathways	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR00096	Glutamine amidotransferase superfamily signature	-	-	236	245	3.1E-11
PANTHER	PTHR11405	CARBAMOYLTRANSFERASE FAMILY MEMBER	-	-	3	360	6.1E-53
NCBIfam	TIGR01368	JCVI: glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	IPR006274	Carbamoyl-phosphate synthase, small subunit	5	375	0.0
Hamap	MF_01209	Carbamoyl-phosphate synthase small chain [carA].	IPR006274	Carbamoyl-phosphate synthase, small subunit	3	378	47.713882
PRINTS	PR00099	Carbamoyl-phosphate synthase protein GATase domain signature	-	-	194	208	5.3E-39
PRINTS	PR00099	Carbamoyl-phosphate synthase protein GATase domain signature	-	-	281	298	5.3E-39
PRINTS	PR00097	Anthranilate synthase component II signature	-	-	264	275	1.1E-5
PRINTS	PR00099	Carbamoyl-phosphate synthase protein GATase domain signature	-	-	306	317	5.3E-39
CDD	cd01744	GATase1_CPSase	IPR035686	Carbamoyl-phosphate synthase small subunit, GATase1 domain	194	371	4.38483E-111
Pfam	PF00117	Glutamine amidotransferase class-I	IPR017926	Glutamine amidotransferase	197	372	1.1E-45
PRINTS	PR00096	Glutamine amidotransferase superfamily signature	-	-	264	275	3.1E-11
PRINTS	PR00097	Anthranilate synthase component II signature	-	-	236	245	1.1E-5
Gene3D	G3DSA:3.50.30.20	-	IPR036480	Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily	2	151	1.8E-63
Pfam	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain	IPR002474	Carbamoyl-phosphate synthase small subunit, N-terminal domain	7	132	2.1E-50
PRINTS	PR00099	Carbamoyl-phosphate synthase protein GATase domain signature	-	-	233	247	5.3E-39
Gene3D	G3DSA:3.40.50.880	-	IPR029062	Class I glutamine amidotransferase-like	152	377	7.2E-81
PRINTS	PR00096	Glutamine amidotransferase superfamily signature	-	-	349	362	3.1E-11
SUPERFAMILY	SSF52317	Class I glutamine amidotransferase-like	IPR029062	Class I glutamine amidotransferase-like	153	377	6.42E-62
FunFam	G3DSA:3.40.50.880:FF:000011	Carbamoyl-phosphate synthase small chain	-	-	152	378	2.0E-129
SMART	SM01097	CPSase_sm_chain_2	IPR002474	Carbamoyl-phosphate synthase small subunit, N-terminal domain	3	133	4.9E-92
FunFam	G3DSA:3.50.30.20:FF:000001	Carbamoyl-phosphate synthase small chain	-	-	2	151	7.1E-66
SUPERFAMILY	SSF52021	Carbamoyl phosphate synthetase, small subunit N-terminal domain	IPR036480	Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily	4	144	1.44E-56
PRINTS	PR00099	Carbamoyl-phosphate synthase protein GATase domain signature	-	-	264	280	5.3E-39
PRINTS	PR00097	Anthranilate synthase component II signature	-	-	349	362	1.1E-5

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.