Pseudomonas fluorescens EGD-AQ6, O204_RS152170
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens EGD-AQ6 contig12, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCGCCAAGCGCAGGTGCCGATCATCATGCTCACCGCCAGCTCCGACGAGGCCGACCGCGTGATCGGCCTGGAGCTGGGCGCCGACGATTACATCGGCAAA CCCTTCAGCCCCCGCGAGTTGCAGGCGCGGATCAAAGCCCTGTTGCGTCGCTGCCAGTTTGGCCAGGAACGCAGCAGTGGTGGCGAGGTGTTGGTGTTTG ATGAATGGCGCCTGGATATGATCAGCCACCGCCTGTTCCATGTGGACGGCGAAGAAGTGATCCTCTCCGGTGCCGACTTTGCCCTGCTCAAATTGTTTCT CGACCACCCGCAGCAGATCCTCGACCGTGACACCATTGGCAACGCCACCCGTGGCCGCGACCTGATGCCGCTGGACCGTATCGTCGACATGGCTGTCAGC CGTCTGCGCCAACGCCTGCGCGATACCGAAAAACCCCCGAGGCTGATCCGCACGGTGCGCGGCAGCGGTTATCAACTGGCAGCCAGCGTGGTTGCCGGCA
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| DNA Sequence for Gene |
>O204_RS152170
ATGCCCACTGACCATTTGACCGAGCGCCGTCGCCGCTTCCCGGTGCCACGCTCGTTGCTGGGGCGCATGCTGCTGCTGACACTGCTGGCGGTGCTGTTTG CCCAGGCGCTGTCCAGTGTGATCTGGGTCTCGCAATTACGCGCCACTCAGCTCGAAGGCCTGGTCACCAGCGCCCGCAGCCTGGCGCATTCGATGACCGC CAGCGTGAGTTATTTCCGTTCGTTGCCGGTGGCATATCGACCGTTGGTGCTGGACCAATTGCGCAGCATGGGCGGCACCCGTTTCGTCGTGACCCTCAAT GATCGCCCGTTGGACATGGCCATCCTGCCGCAGACACCGCGCAAGCAGGCAGTGCTTGAAGCGGTCAACGAAGTGTTGAAACAAACCCTCGGCGCCGATG TGCATATCTCCGTGGAGTTCGTCAGCGCCGAAGACCTGCGTATCTTCAATGCCGGCCTGAAACTCGACGAACTGCCACGCTCCTGGGCCCATTACGCGTT GACCCTGGAACCGGTTAACCCACCGGTACTGGTTACCCAGATCCAGCTCGCGCCCGGCGAATGGCTGTACATCGCCTCGCTGTTGCCCGAGCCCTACACC AGCCTGGAAGAACAGGGCCTGCCGTCCCAGCAGGTGTGGTTTATCGTGCTGACCAGTGGTTTCCTGCTGCTGTTCATCGGCTTGCTGGTGCACTGGCAGA GCCGGCCTCTCAAGCGCCTGGCGCGGGCGGCGCGGGACATGTCCCTGGGGGCCGACGTAGAGCCGGTGGCCGAAGGCGGCGGCAGTGAAGTGGTGGAAGT GGGCCGTGCGTTCAACGCCATGCGTGAGCGCATCAGCCGTTACCTGACCGAGCGCAGCCAGTTGTTCAGCGCGATTTCCCACGACTTGCGCACCCCGATT ACTCGCCTGCGCCTGCGCGTGGAATTGCTTGAAGACGAGAACCTGCAAACCAAGTTCGGCCGCGACCTGGATGAGTTGGAGTTGCTGGTGAAAGGCGCGC TGCAATGCGTGAAAGACACCGATATCCACGAAAACATCGAACCGGTCGACCTGAACCACGTGCTCGACTGCCTGGTGGAACCGTACCTGGCGCCGAACGG CAATGGCCGCGTTACCCAGCATGGCCGGGCGTTGACGACTTATCCGGGCAAACCGCTGGCGCTCAAGCGCTGCATCGGCAACTTGATCGACAACGCGTTG AAGTATGGCCAGAACGCCCACCTGTACATCGAGGACGACGGCGCGGAGTTCGTTCTGCACGTGGATGACGAAGGCCCCGGCGTGCCGGAGCAGCGGTTGG AGCAGGTGTTTGAACCGCACTTCCGCCTGGCTGGGCAGCAACAGGGCTACGGCCTGGGCCTGGGAATTGCGCGCAACATTGCGCACAGCCATGGCGGCGA AGTGAGTCTGCAGAATCTGCGCGAGGGTGGCTTGCGCGTGACCTTGCAGCTACCCCGCGGATTAGATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ATGCATGCGGGCCCATTGTGGGAGCTGGCTTGCCTGCGATAGCGGTGTATCAGCCAACTCATCTGGCACAGACAGACCGCTATCGCAGGCAAGCCAGCTC CCACATGTTGATCTTCATTAGGTCAGATGCTTTGGCGCAGTCGGGCCAAGTCTCTAAGGGGCGGCGCCCCAAACAGCCGGCTGTACTCCCGACTGAACTG CGACGGGCTTTCATACCCCACGCGATACCCCGCTGCCGACGCTTCCAACCCTTCGGCAATCATCAACCGTCGCGCTTCCTGCAAGCGCAACTGCTTCTGA TACTGCAACGGGCTCATGGCGGTGATCGCCTTGAAGCGGTGGTGCAGGGTCGAGACGCTGAGGTTCACTGCCTTGGCCAGGTCATCGATGCGCAGCGGTT GCTCGTAGTTGCCGTTCAACCACGTGATCGCCTGGCTGACCCGATGGCTCTGACTGTTGGCCACGGCGATTTCATACAGCCGATAACCCTGCGGCCCCCG
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| Amino Acid Sequence |
>sensor histidine kinase
MPTDHLTERRRRFPVPRSLLGRMLLLTLLAVLFAQALSSVIWVSQLRATQLEGLVTSARSLAHSMTASVSYFRSLPVAYRPLVLDQLRSMGGTRFVVTLN DRPLDMAILPQTPRKQAVLEAVNEVLKQTLGADVHISVEFVSAEDLRIFNAGLKLDELPRSWAHYALTLEPVNPPVLVTQIQLAPGEWLYIASLLPEPYT SLEEQGLPSQQVWFIVLTSGFLLLFIGLLVHWQSRPLKRLARAARDMSLGADVEPVAEGGGSEVVEVGRAFNAMRERISRYLTERSQLFSAISHDLRTPI TRLRLRVELLEDENLQTKFGRDLDELELLVKGALQCVKDTDIHENIEPVDLNHVLDCLVEPYLAPNGNGRVTQHGRALTTYPGKPLALKRCIGNLIDNAL KYGQNAHLYIEDDGAEFVLHVDDEGPGVPEQRLEQVFEPHFRLAGQQQGYGLGLGIARNIAHSHGGEVSLQNLREGGLRVTLQLPRGLD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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