Pseudomonas fluorescens EGD-AQ6, O204_RS154865
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens EGD-AQ6 contig1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTATGTAAAGAAAGTTGTGTTTCCTCTTGAGGTGTTACCTGTTGTTTCTGCGTGTGCAGCCCTGTTTCATGCTTTGGTTAGTTTGGCTGTCTGGGTGATC GCTTATACGGTGCTGGTCGATATACCTCATTGGCACGCACTGTTGCTGCCTCTCATATTGTTGCCGCTTTTATTACTGGCTCTCGGACTCGCTTGGTTTC TTGCGTCCCTCGGGGTCTTCTTGCGTGATGTGGGGCAGACCGTAACTATTATTACGACAGTTATGATGTTTCTTGCTCCGGTGTTCTTTCCTGTAAAAAA TTTACCGGCTGAATTTCAACCGTTAATCATGGCTAACCCATTGACCTTTATCATCGAGCAGGCACGCGATGTTTTAATCTGGGGAAAGCTGCCTGACTTT AAAGGGTTATTGAACTATTCGCTCGTGGCGCTGGCTGTATTATGGGCGGGCTTTGCGTGGTTTCAGAAAATGCGAAAAGGATTTTCCGATGTGCTCTGAT
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| DNA Sequence for Gene |
>O204_RS154865
ATTGCGATCGAAGTAAAAGGAGTGAGTAAGTGCTTCCATATCTACGATGCTCCCCGTGATCGTTTTTTACAGTTTTTCAATGGGAAGAGAAAGCAGTATT TTCGAGAGTTTTGGGCGCTGCGCAATGTATCGTTTGTTGTAAATAAGGGCGAAACAGTAGGGGTGATAGGGCGCAATGGCAGTGGCAAGTCTACACTCTT GCAAATTATCTGCGGCACCTTAACGCCAAGTGCTGGATCGGTCCTGACTACTGGGCGCGTCGCCGCACTGTTGGAGTTAGGTTCTGGCTTCAATCCAGAC TTCAGCGGGCGTGAAAACGTCTATATGAACGCTGCAATACTGGGGCTGTCGAGAGATGAAACCGACGCACGTTTTTCTGAGATTGAAGCGTTCGCAGAAA TCGGCAGCTTTATAGATCAACCTGTAAAAAGTTACTCCAGTGGGATGATGGTTCGCCTTGCGTTTGCCGTGGCAATCAATGTAGACCCGCAAATTCTGAT TGTTGACGAGGCGTTATCCGTTGGCGATGAGTTGTTTCAGAGAAAGTGTTTTGCACGCATCGAAGCCATCAAGGCGGCGGGTGCTACGATTTTGTTCGTC TCGCATTCGGGGAGCGCAATTGTTGAGCTTTGTGATCGAGCTATTCTCTTGGATAACGGTGACAAACTCACAGAAGGCTTGCCAAAAAATGTAATAGGGA AGTATCAGAAACTACTGTATGCGCCCAGTGATAAGGTTGACGCGATTCGCGCGTCAGTTAGTGTTGGGGAGGGGACTTCGGCTGCAGGTGTCGCTGCCTC GCAGTCAGGCACCGCTTCAAGAAAAGCACCGGATGAATTGGATGAGTTTTTCGATCCTCATTTGAAGTCGCAAAGTGAAATGTCCTACGAGTCACATGGT GCGCTGATTCGAACTCCGCAGATCATTAACATGGCAGGCGAGCCAGTTAACTGTATAAAGCGCGGGCGCACGTATCGTTACACATACGAGGTTGGGTTTT CGGTTGCCGCAACTGCAGTTCGGTTCGGCATGATGATCAAAACCTTGGCTGGGGTTGAACTTGGCGGCGCGGCAACAGCCTTGCATGCCCAGGATGCTAT TAGTTATGTTGAGCCCGGAGCATCGATTCGGATTGAGTTCGCGTTCGAGTGCAACCTGAACGCGGGGACCTATTTTCTCAACGCTGGTGTTCTGGGGGTG ACGAATGGGGGGAAGACCTACCTTCACCGTCTCTTGGATGCTTGCTTGTTCCGAGTACTGCCGGGCCCAGATCTGTTGGCGACCGGTATCATTGATTTTA AGTGTGTCCCGGACGTTTTGATATCCAGCAAAAATGAAATCGATCGACTTGATCAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCTGCAGTGGATAATTCGTGATGAGCAGTAATGTGGTCTATCAAGTGTCGGCTGTTGATCCCGAACAAAGAGCGATTGCAAAGGGGCAGAAGCCTTTCAC GTTATGGTTGACGGGCTTGAGTGGTTCGGGAAAATCGACGATTGCCAACGCACTTGAAGTTGCCTTGGTGCAGCGTAATAGGCACACCTACTTGATTGAC GGCGACAATGTCCGCATGGGGTTGTGCCGTGACCTGGGGTTCAGTGACGCTGATCGTGAAGAAAATATCCGGCGAGTGGCAGAAGTGTCTCGGCTATTTA TCGATGCGGGTCTTATCGTGATCACCTCGTTTATTTCGCCGTTTGAGCGGGATCGTGCTCTTGCGCGTGAAATTATTGGCGCTGGGGCGTTTATTGAGGT GTTCATTGATGCGCCTTTGTCTGAATGTGAGCGCCGGGATCCTAAAGGTTTGTATAGCAAAGCGCGTAAAGGTTTGATTAAAAAATTCACCGGTATTGAT
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| Amino Acid Sequence |
>ABC transporter ATP-binding protein
MAIEVKGVSKCFHIYDAPRDRFLQFFNGKRKQYFREFWALRNVSFVVNKGETVGVIGRNGSGKSTLLQIICGTLTPSAGSVLTTGRVAALLELGSGFNPD FSGRENVYMNAAILGLSRDETDARFSEIEAFAEIGSFIDQPVKSYSSGMMVRLAFAVAINVDPQILIVDEALSVGDELFQRKCFARIEAIKAAGATILFV SHSGSAIVELCDRAILLDNGDKLTEGLPKNVIGKYQKLLYAPSDKVDAIRASVSVGEGTSAAGVAASQSGTASRKAPDELDEFFDPHLKSQSEMSYESHG ALIRTPQIINMAGEPVNCIKRGRTYRYTYEVGFSVAATAVRFGMMIKTLAGVELGGAATALHAQDAISYVEPGASIRIEFAFECNLNAGTYFLNAGVLGV TNGGKTYLHRLLDACLFRVLPGPDLLATGIIDFKCVPDVLISSKNEIDRLDQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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