Pseudomonas fluorescens EGD-AQ6, O204_RS155465
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens EGD-AQ6 contig1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCCGCACGCCTGGCTCCGGTGGTGGACATGGCCGAAAAGGCCGAGAAAACCGCCGTGCAGCGCCTGGGTTACTTCCAGGGGCAGGTGCGCTTGGCCGAGA GCAAGCTGGGCGACCTGGAGCGCTTTCGGGGCGAATACCAGCAACAGTGGATCGAGCGTGGCGCCAAAGGTGTGTCCGGCCAATGGCTGATGGGCTACCA GGGCTTTCTCAACCAACTGGAAACGGCTGTCGGCCAGCAGCGCCAGAGCCTGGCGTGGCACCAGAACAACCTCGATAAAGCCCGCGAAAGCTGGCAAGCC GCGTTTGCCCGGGTCGAAGGCCTGCGCAAGCTGGTGCAGCGCTATATCGACGAGGCGCGGGCCATCGAAGACAAGCGTGAACAGAAGCTGCTCGACGAAC TCTCCCAACGCATGCCGCGCAAAGACGTCTATTGACAGTTGCCCATGGCGCCTTCTCCTGCTAAACCTTGTGTCATTGCCAATGACAAGGAAGCAGTCGC
|
|
| DNA Sequence for Gene |
>O204_RS155465
ATGTCAGTCGAGTCAGACGTATCCCTGGATGGGAAGAAGTTAACGATCGTGGTCAAAGGCCGGTTCGATTTCGGCAGCCACCAGACGTTTCGTGATGCCT ACGAACGGTTTTACAAGGTTCCCGAGTCGTACGTCGTCGACTTGAAGGAAACCACCTACATGGACAGTTCGGCCTTGGGCATGCTCCTGCTCCTGCGTGA CCACGCGGGTGGCGACCAGTCGGAGGTCAGGGTGGTCAATAGCAACTCAGACGTGCGCAAGATCCTCGCCATCTCCAACTTCGACAAGCTGTTCGACATC AGTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCGCCCTGGCCCCGGTCCTTGAACCGCTGACGATCCTGATTGCCGAAGACAGCGCCGCCGATTTGCTGTTGCTGTCGACCATCGTGCGGCGCCAAGGTCA CCAGGTACTCACGGCCACCAATGGCGCTGAAGCGGTCGACGTGTTTAGCCGTGAGCGCCCGCAACTGGTGTTGATGGATGCCCTGATGCCGGTGATGGAC GGCTTTGAGGCGGCACGGCGGATCAAGCAGTTGGCGGGTGAAGAGTTGGTGCCGCTGATTTTCCTCACCTCCCTGCGCGAGAGCGAAGCGCTGGCCCAGT GCCTGGATGCCGGCGGTGATGACTTCCTGCCCAAACCCTACAACCAGCTTATTCTCGCGGCGAAGATCAACGCCATGGACCGCCTGCGTCGGTTGCAGGC GACGGTCTTGCAGCAGCGCGACCTGATCGCCAAGCATCACGACTATCTCCTGCATGAGCAGCGAGTGGCCAAGGCGGTGTTCGATAAGGTCGCGCATTCG
|
|
| Amino Acid Sequence |
>anti-anti-sigma regulatory factor
MSVESDVSLDGKKLTIVVKGRFDFGSHQTFRDAYERFYKVPESYVVDLKETTYMDSSALGMLLLLRDHAGGDQSEVRVVNSNSDVRKILAISNFDKLFDI S
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|