Pseudomonas fluorescens EGD-AQ6, O204_RS155535
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens EGD-AQ6 contig1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGCGACGGTTTCAAGACCCTTGAAGAGGGGCAAAAAGTCGAGCTCGAGGTTACCCAAGGCGCCAAAGGTGCTCAGGCTGAAAACGTCCGCGTCCTATGAA CTTCATGATTGTTTCAGTAGACGCTAAAAAAGCGTCGACTGGGTGTACGGAGACTAGTTAGCGGCTTTCCCAGGGGCCGCCTCAACACCTTGTCGGACAT TTCCGCTGTAGCAGCAGGCGGACACAAATCCAAACTGTGGGAGCGGGCTTGCTCGCGAATGCTGACGATCAGTCGCCAGACGTGCTGGCTGACCCTCCGC CTTCGCGAGCAAGCCCGCTCCCACATTTGAATCGATTTACACTTTTTTTTGGGGGGGGGCGGTTGCTTGTGAGCTCGTCAACGCTCGCGCCGCAAGCGAT GTAACCGGGAAAACAAAAGTTGGAAGGCTTCTTGCAATACCACCTGCAAGACGCCTGACCGCGTCAAAACTTTGCTTCAAGGAAACGAGGAATACCGGTG
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| DNA Sequence for Gene |
>O204_RS155535
GTGGATCGCTCTCAAATGCTCGGCACGGCCCGGACGACCCTGACTGACCTCTCGCGAGGCAATCTGGGTGTGCCGTTGTTGTTGCTGGTGATGCTGGCAA TGATGATGTTGCCGATGCCGCCGTTCCTGCTGGACGTGTTCTTCACCTTCAACATTGCCCTTTCCGTCGTGGTACTGCTGGTCTGCGTGTACGCCCTGCG GCCCTTGGATTTCGCCGTATTCCCGACCATTCTGCTGGTGGCGACCCTGCTGCGACTGGCGCTCAACGTCGCGTCCACCCGTGTGGTCATGCTCCACGGT CAGGACGGTCACGCTGCCGCCGGTAAGGTGATCCAGGCCTTCGGTGAGGTGGTGATCGGCGGTAACTACGTGGTCGGTATCGTGGTGTTCGCGATCCTGA TGATCATCAACTTCGTGGTAGTAACCAAGGGCGCCGGGCGGATTTCCGAGGTGAGCGCGCGGTTTACCCTCGATGCGATGCCCGGCAAGCAGATGGCGAT CGACGCTGACCTCAACGCCGGCCTGATCGACCAGAACCAAGCCAAGTCGCGCCGCCTGGAAGTGGCCCAGGAAGCCGAGTTCTACGGTTCCATGGACGGT GCCAGCAAGTTCGTGCGCGGTGATGCCATCGCCGGCCTGCTGATTCTGTTCATCAACCTCATCGGCGGTATGGCCGTGGGTATCTTCCAGCATGGCATGA CCTTCGGCGATGCGGGCAAGGTGTACGCCCTGCTGACCATCGGTGACGGTTTAGTGGCGCAATTGCCATCACTGTTGTTATCTACAGCTGCGGCGATCAT GGTGACTCGTGCTTCGGGCTCCGAAGACATGGGCAAGCAGATCAGCCGGCAGATGTTTGCCTCGCCCAAGGCCTTGGCCGTGGCGGCGGGCATCATGGCG ATCATGGGTATTGTACCGGGCATGCCCCACGTGTCGTTCCTGAGCATGGCAGCCATGGCGGCTGGCGGTGCTTACCTGTTCTGGAAAAAGCAGAATGCGG TCAAGGTCCAGGCCCAGCAAGAGATCGCGCGCCAGCAGGAACTGCTGCCATCCCCGGCCCGTGCTCAGGAAACCAAGGAGCTGGGCTGGGATGACGTGAC CCCGATCGACATGATCGGCCTGGAAGTCGGCTACCGCCTGATCCCGCTGGTGGACCGCAACCAGGGCGGCCAATTGCTCGCGCGGATCAAGGGCGTGCGC AAGAAGCTGTCCCAGGACCTGGGCTTTTTGATGCCCACCGTGCACATCCGCGACAACCTCGACCTGGCTCCGAGTGCCTATCGCCTGACCCTCATGGGCG TGATCCTGGCCGAAGCCGAGATCTACCCAGACCGCGAACTGGCGATCAACCCAGGGCAGGTGTTCGGCAGCCTCAACGGTATTACCGCCAAAGATCCGGC TTTTGGCCTGGACGCGGTGTGGATCGAAATCAGCCAGCGCAGCCAGGCACAATCCCTCGGCTACACCGTGGTGGACGCCAGCACCGTGGTCGCCACCCAC CTCAACCAGATCCTGTACAAGCACTCCCATGAGCTGATTGGCCATGAGGAAGTCCAGCAATTGATGGGTTTGCTGGCCAAAGCGTCGCCGAAACTGGCCG AAGAGCTGGTGCCGGGTGTGCTGTCGCTGTCGCAGTTGCTCAAGGTGTTGCAGGCGTTGCTGGCCGAACAGGTGCCGGTACGGGACATCCGCAGCATTGC CGAGGCCATCGCCAACAATGCCGCCAAGAGTCAAGATACTGCCGCCCTGGTGGCCGCGGTGCGCGTCGGATTGTCGCGTGCAATCGTCCAAAGCATTGTA GGGCTTGACTCCGAGCTGCCTGTGATCACCTTGGAACCAAGGTTGGAACAAATATTGCTCAATAGTATTCAGAAGGCAGGACAAGGCCAGGAAGAGGGCG TTCTGCTGGAGCCAAGCATGGCTGAGAAGCTGCAGCGTTCGTTGATCGACGCCGCACAGCGCCAGGAAATGCAGGGCCAACCGGTGATTCTGCTGGTGGC AGGCCCCGTCCGGGCGATGTTGTCGCGGTTTGGACGCCTGGCAGTACCGAATTTGCACGTTTTGGCTTATCAGGAAATTCCTGACAACAAGCAAGTGACT ATCGTCGCGACAGTAGGCCCCAATGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGGTAGTGGGTTATGCAAGTGAAGCGTTTTTTCGCCGCCGATATGCGTCAGGCCATGAAACTGGTTCGTGATGAGCTGGGCGCCGACGCCGCGATTATCG GAAACCGTCGTATTGCCGGCGGTGTCGAGCTGACGGCTGCCCTGGATTACACCCCCCAGGCCCTGGCGCCGCGTGTGCCGAACATGGAGCTCGAAGACGA GCTGCGCAAGACTGCTTCACGCATTGTCTCGGCCCAGGCTGAACTGAGCATGCGCGGCGACAGCGATGCCACCACTAATCGCCAGTTGTTCGCCGGCCTG CCGCTGACCGCTTCCGAGCCGCTGGTCGAGCCGACCTTCAAAGAACCGCCACGTCCTGCTGCGCCTGCTCCGGCGCCTGCGGTTGACCAGCGGGTGTTCG ACTCGATGCGCTTTGAACTCAATGGCCTGCGTGAGCTGCTGGAAGTGCAGCTTGGCTCGTTGGCCTGGAACCAGCTGCAAGGCAGCAAGCCGCAACAGGC
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| Amino Acid Sequence |
>flagellar biosynthesis protein FlhA
MDRSQMLGTARTTLTDLSRGNLGVPLLLLVMLAMMMLPMPPFLLDVFFTFNIALSVVVLLVCVYALRPLDFAVFPTILLVATLLRLALNVASTRVVMLHG QDGHAAAGKVIQAFGEVVIGGNYVVGIVVFAILMIINFVVVTKGAGRISEVSARFTLDAMPGKQMAIDADLNAGLIDQNQAKSRRLEVAQEAEFYGSMDG ASKFVRGDAIAGLLILFINLIGGMAVGIFQHGMTFGDAGKVYALLTIGDGLVAQLPSLLLSTAAAIMVTRASGSEDMGKQISRQMFASPKALAVAAGIMA IMGIVPGMPHVSFLSMAAMAAGGAYLFWKKQNAVKVQAQQEIARQQELLPSPARAQETKELGWDDVTPIDMIGLEVGYRLIPLVDRNQGGQLLARIKGVR KKLSQDLGFLMPTVHIRDNLDLAPSAYRLTLMGVILAEAEIYPDRELAINPGQVFGSLNGITAKDPAFGLDAVWIEISQRSQAQSLGYTVVDASTVVATH LNQILYKHSHELIGHEEVQQLMGLLAKASPKLAEELVPGVLSLSQLLKVLQALLAEQVPVRDIRSIAEAIANNAAKSQDTAALVAAVRVGLSRAIVQSIV GLDSELPVITLEPRLEQILLNSIQKAGQGQEEGVLLEPSMAEKLQRSLIDAAQRQEMQGQPVILLVAGPVRAMLSRFGRLAVPNLHVLAYQEIPDNKQVT IVATVGPNG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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