Pseudomonas aeruginosa PA7, PSPA7_4871

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Sequence Data

Strain Pseudomonas aeruginosa PA7 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
TACGTCGACGTGATGCTCTTCGTCCGCGACGAGCGCGGTGGCGAGTCGACGTCGCTGGCGCAGTTGGTGTTGCCCGGCGTGCGGGTGCTCACCTACGGCG AACGGATCGCCGTGGGCGGCGACGGCCAGGACCGTTCGGCCACGGAAAAGGATCCGCGCCCGCCGCGTACCGCCGTGCTGGCGGTGCCGGCGGAAGGCGT GGCGCGGCTGATGCTGGCGAGCCAGGCCGGGGCGTTGCGCCTGGCGATCCGCAGCCAGGACGAGGAACTCTACCGCAGGGAACAGGAAGGCCCGCTGCTG CGGGCCTCGCTGGGCGCTCCAGGCGCGGCGCTGACCCTCGACCAGTTGCTCGAGCGGCGCAAGGCCACGCCGGCCGGCGTACGCAGCGCAGCGCCGCGCG CGCCGGCCGGCGCCGGGGTGGCGGTCTACCGTGGCAGTGCCATGACCCACGAAGCGCCTTGAGAGGGAGCCGGCCCATGCATCGGACCAGGGGAGTACAG
DNA Sequence for Gene
>PSPA7_4871
ATGTGGTGTGGGCTGGCCGGGTTGCTGGCGCTGTCGCTTGCGCAGCCGGCCTCGGCCCTGCCGCAGGGCTGCCTGGAACTGCTGGCGCAGGCGCCGCAGG TCAGTGTCGCCCAGGGGCAGCAGAATGACCTGCGCCTGGCGGTGCCGATCAAGCGCCTGGCCATCGGCGATCCGCAGATCGCCGACGTGCAGTTGCTGGA CCGCAGCAGCCTGCTGGTCACCGGCAAGGAGCAGGGTTCCACCAGCCTGCTGATCTGGACCGCCTGCAGCGCGGAACCACTGCGCAGCCAGGTCGCGGTC GAAGGGCGCGGCAGCGTCGATACCGCAGCCGCGCCAGCGCTCGGGGCGGGGGGCGCGGACGAGTTGCCGAACCAGGTGCAGACCGACATCCGCTTCGTCG AGGTCAGCCGCAGCAAGCTCAAGCAGGCCAGCACATCGTTCGTCCGTCGTGGTGGCAATCTCTGGGTGCTCGGCGCGCCGGGCAGCCTCGGCGACATCAA GGTGAACGCCGACGGCAGCGGCCTGGGCGGTACCTTCGGCGCCGGCGCGTCGGGCTTCAACCTGATCTTCGGCGGCGGCAAGTGGCTGAGCTTCATGAAC GCCCTGGAGGGCAGCGGCTTCGCCTATACCCTGGCGCGTCCGAGCCTGGTGGCGATGAGCGGGCAGAGCGCGTCGTTCCTGGCCGGTGGCGAGTTCCCGA TCCCGGTGCCGAACGGCACCAACGACAACGTCACCATCGAATACAAAGAATTCGGCATCCGCCTGACCCTGACCCCGACGGTGATGAACAACCGGCGCAT CGCCCTCAAGGTGGCGCCGGAGGTCAGCGAGCTGGACTACAGCGCCGGCATCCAGAGCGGCGGGGTGGCGGTGCCGGCCCTGCGGGTGCGGCGCACCGAC ACCAGCGTGATGCTGGCCGATGGCGAAAGCTTCGTGATCAGCGGCCTGACCAGCAGCAACTCGGTGAGCAACGTCGACAAGTTTCCCTGGCTGGGCGACA TCCCGATCCTCGGCGCCTTCTTCCGTTCGACCAAGCTGGACAAGGACGACCGCGAGCTGCTGATGATCGTCACCCCGCACCTGGTCCAGCCGCTGGCCGC CGACGCGCAGTTGCCGGGCCTGCCCGGCGAAGGCCTGCGCCATTACGACCCGGGCTTCTCGCGCCTGTATTTCCTCGAGCGCGGCGAATACGACGGCCAG CAGAACGATACCGGACTGTCGGACTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGAGGCGCGGATGAACCAGAATTTCGTGGCGCTGACCCAGCATCCCGGGGAGCTCGACTGGCTGCAGAACAGCCTGGCCTCCGCCGGGCAGGTGGTGCCG GCCGGCAGTGCGAGCCTGGAGGAGCTGCTGGCGCTGCTCGATGTCACCGCCGCCGGCGTGCTGTTCATCAGCCTCGGCAAGAACAACCTGGTGTCCCAGG GCGCGCTGGTCGAAGGGTTGGTCTCGGCACGGCCGATGCTCTCGGTGGTCGCCATCGGCGATGGCCTGGACAACCAGTTGGTGCTCGCGGCGATGCGCGC CGGGGCGCGCGACTTCATCACCTACGGTGCCCGCGCCAGCGAGCTGACCGGGCTGGTTCGCCGCCTCGGCGGGCGCCTGCCCAGCGTCCCGGTGAGCGCG GCGCGCCAGGGCGAGTTGCTGACCCTGGTCAGCGCGCGGCCGGATGCCGACGGCGCGTTCGTCGCCCTGCACCTGGCCAAGGCGCTGCAGGAACAGACGC
Amino Acid Sequence
>putative type II secretion system protein
MWCGLAGLLALSLAQPASALPQGCLELLAQAPQVSVAQGQQNDLRLAVPIKRLAIGDPQIADVQLLDRSSLLVTGKEQGSTSLLIWTACSAEPLRSQVAV EGRGSVDTAAAPALGAGGADELPNQVQTDIRFVEVSRSKLKQASTSFVRRGGNLWVLGAPGSLGDIKVNADGSGLGGTFGAGASGFNLIFGGGKWLSFMN ALEGSGFAYTLARPSLVAMSGQSASFLAGGEFPIPVPNGTNDNVTIEYKEFGIRLTLTPTVMNNRRIALKVAPEVSELDYSAGIQSGGVAVPALRVRRTD TSVMLADGESFVISGLTSSNSVSNVDKFPWLGDIPILGAFFRSTKLDKDDRELLMIVTPHLVQPLAADAQLPGLPGEGLRHYDPGFSRLYFLERGEYDGQ QNDTGLSD
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site