Pseudomonas fluorescens AU6026, MZ22_RS11060
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU6026 Scaffold_300, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGATTTTCCTGTCGGTGTTCAACGCCATCGTTGCCATCGTGATCCAGATTGGCCGCGTGGTGTTCAGCAGCGGTCGCGATGCGCTGTGGACGCCGAGTAT CAACAAGCTGTTCACGCGTATTCACCCGCGCTGGGACTCGCCGTGGCTGGCGACGCTGTTCCTGGCGATACCCTCGGCGCTGTTGAGCTTCAGTTCTAAC CTGGCCGACCTGACCTCGTTCAGCGTGTTGCTGATCATGCTGGTGTACCTGGTAGTGGCGCTGAGCGCGCTGATGAGCCGGGTGCTGCTGCGTGATCGCG AGCATCCCTATCGCATGCCGTTATGGCCGCTGCCGGCATTGCTGGCGGTACTGGGTGCCGGTTACCTGCTGGTCACCTTGATCCTGGAGGCCTCGGTACG CGACATCATGATTATCATCGGCTTGCTGGCCCTGTCGGTGATCTTGTATTGCATCAGTGGCCGGTTGAGTCCGGCGTTCCAGAAACTGTAAGGAGTGGGT
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| DNA Sequence for Gene |
>MZ22_RS11060
ATGCGTGCACGTCAATTGGGCATTACGTTGGGGTTGGGCATGCCCGGCGAATTGAATGCCATCACCGATGTTCCCGGGGTTCGCGTCGGTCACTCGACGG TCAAGGCCTGTGTTGACGGTAAGCAGGTGCGCACCGGCGTCACGCTGGTCCAGCCGCGAGCCGGGGAAGCGCGGCAGCAACCGTGTTTTGCCGGCTACCA CGTGCTCAACGGTAACGGCGACGCCACGGGCCTTGAGTGGATCAGCGAGGCGGGGCTGTTGACCACGCCGATGGCCATCACCAACACCCACAGTATCGGG GTGGTGCGCGACAGCCTGATCGCCCTGGAGCGCGAGCGCCTGGCGGACCCTGCGGTGTACTGGTGCATGCCGGTGGTCATGGAAACCTACGATGGCCTGC TCAACGATATCTGGGGCCAGCACGTGCGCCCAGAGCATGTGCGCCAGGCTCTGGACCAGGCCGAAAGCGGCCCGGTGCAGGAAGGCGCGGTGGGCGGTGG TACCGGCATGATTTGCCACGAGTTCAAGGGCGGCATCGGCACGGCGTCACGGCGGTTGCCAGCAGAGCAGGGCGGCTGGACTGTCGGCGTACTGGTGCAG GCCAACCATGGCAAGCGCCAGGAGCTGCGGGTCGATGGCTACCCGGTGGGCCGTCACTTGATGGGCATTGCTTCGCCCTTTGCCGAGCGAGGCACCCCTG GCATGGGCTCCATTGTGGTGATCATCGCCACGGACGCCCCCTTGCTGCCCCACCAATGCCAGCGCCTGGCACAGCGCGCGTCCATCGGCATTGCGCGCAC CGGTGGCGGCACCGAGGATTCCAGCGGCGACCTGTTCCTGGCGTTTGCCACCGGCAACCGTGATTTGCCGCCAGCCGACTATGGGCGCAAGGACCTGCCC CTCAGCACCGGGTTGCAGATGGTCAACAACGACCATATTTCGCCGCTGTTCAGCGCGGCGGCAGAGGCGGTGGAGGAGGCGATCATCAACGCCATTCTGG CAGGTGAAGACATGACCACCCAAGACGGCGTCGAGGTGCCGGGCCTGGCTGGCGAAACCCTCTTGGCAGCCCTGCAACAGTGTGGCTGGAGTATGTCCCG GTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGGGGGACAGCGCACTTTAATAGTGCGAATAGTGGCTCTTTAATGTTGCTAATGACACCGTGACAATATATTGGATCCATTAATCAAGTGAGCCGTTCGC TTAGAGCGGCTTTACTTGTATTTAATATTTAAATAGTGGTGTGCGCCGATTCGGCCACATAAACGCAACGGCCCCCAATAAACACTGCGTGGGACTTCCG CAACTTGAACCTGCGTCACAATTGTGCGATGGAAATAGATGTAGACGAAAGATTTCAAGTTGTGTCAGTTTTCTTACGCCTTCAAAAGAGGTGAGTGATA GGACTATCCTCGCCCGCGAGGTTCCTATCGAACAAAGACTGATGCACTTGCAAACAAGGAAGTACGTTTATGTCAAAAGTAAAAGACAAGGCTATTGTAT CTGCCGCGCAAGCCAGCACTGCTTACTCGCAAATCGATAGCTTCAGCCATTTGTATGACCGTGGCGGTAATCTCACGGTCAATGGCAAACCGTCCTACAC
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| Amino Acid Sequence |
>D-aminopeptidase
MRARQLGITLGLGMPGELNAITDVPGVRVGHSTVKACVDGKQVRTGVTLVQPRAGEARQQPCFAGYHVLNGNGDATGLEWISEAGLLTTPMAITNTHSIG VVRDSLIALERERLADPAVYWCMPVVMETYDGLLNDIWGQHVRPEHVRQALDQAESGPVQEGAVGGGTGMICHEFKGGIGTASRRLPAEQGGWTVGVLVQ ANHGKRQELRVDGYPVGRHLMGIASPFAERGTPGMGSIVVIIATDAPLLPHQCQRLAQRASIGIARTGGGTEDSSGDLFLAFATGNRDLPPADYGRKDLP LSTGLQMVNNDHISPLFSAAAEAVEEAIINAILAGEDMTTQDGVEVPGLAGETLLAALQQCGWSMSR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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